Evidence map›Paper›PMID 28348830›Full record

ArticleMicrobial genomics2016

Population-genomic insights into emergence, crop adaptation and dissemination of

Caroline L Monteil, Koji Yahara, David J Studholme, Leonardos Mageiros, Guillaume Méric, Bryan Swingle, Cindy E Morris, Boris A Vinatzer, Samuel K Sheppard

Abstract read
In one paragraph

Article in Microbial genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Evolution and spread ofMicrobial genomics · 2025
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Using of Essential Oils and Plant Extracts againstPlants (Basel, Switzerland) · 2022
    Article
  13. Review
  14. Article
  15. Bacteriophage Control ofPlants (Basel, Switzerland) · 2022
    Article
  16. Pathogens (Basel, Switzerland) · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Migration Drives the Replacement ofFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Caroline L Monteil4​Laboratoire de Bioénergétique Cellulaire, Institut de Biosciences et Biotechnologies d'Aix-Marseille, CEA, 13108, Saint-Paul-lès-Durance, France.
Koji Yahara1​Institute of Life Science, College of Medicine, Swansea University, Swansea, UK.
David J Studholme6​Biosciences, University of Exeter, Exeter, Devon, UK.
Leonardos Mageiros1​Institute of Life Science, College of Medicine, Swansea University, Swansea, UK.
Guillaume Méric7​The Milner Centre for Evolution, Department of Biology and Biotechnology, University of Bath, Claverton Down, Bath, UK.
Bryan Swingle8​School of Integrative Plant Science, Section of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, NY, USA.
Cindy E Morris3​INRA, UR0407 Pathologie Végétale, Montfavet cedex, France.
Boris A Vinatzer2​Department of Plant Pathology, Physiology, and Weed Science, Virginia Tech, Blacksburg, VA, USA.
Samuel K Sheppard7​The Milner Centre for Evolution, Department of Biology and Biotechnology, University of Bath, Claverton Down, Bath, UK.

Funding

Medical Research Council MR/L015080/1Wellcome TrustWellcome Trust 088786/C/09/Z
6 · The paper itself

Abstract

Many bacterial pathogens are well characterized but, in some cases, little is known about the populations from which they emerged. This limits understanding of the molecular mechanisms underlying disease. The crop pathogen

Indexed as

MetagenomicsBacterial ProteinsCrops, AgriculturalGenome, BacterialGenome-Wide Association StudyPhylogenyPlant DiseasesPseudomonas syringaeVirulenceBacterial Proteinscrop diseasesDisease emergencepathoadaptationPseudomonas syringaetype III secreted effectors

Identifiers

PMID28348830
PMCPMC5359406

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.