Evidence map›Paper›PMID 28348570›Full record

ArticleFrontiers in plant science2017

DNA Methylation Affects the Efficiency of Transcription Activator-Like Effector Nucleases-Mediated Genome Editing in Rice.

Hidetaka Kaya, Hisataka Numa, Ayako Nishizawa-Yokoi, Seiichi Toki, Yoshiki Habu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. The gymnastics of epigenomics in rice.Plant cell reports · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Hidetaka KayaInstitute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO) Tsukuba, Japan.
Hisataka NumaAdvanced Analysis Center, National Agriculture and Food Research Organization (NARO) Tsukuba, Japan.
Ayako Nishizawa-YokoiInstitute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO) Tsukuba, Japan.
Seiichi TokiInstitute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO) Tsukuba, Japan.
Yoshiki HabuInstitute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO) Tsukuba, Japan.
Institute of Agrobiological Sciences · JPAdvanced Analysis Center · JPNational Agriculture and Food Research Organization · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome editing in plants becomes popular since the advent of sequence-specific nucleases (SSNs) that are simple to set up and efficient in various plant species. Although transcription activator-like effector nucleases (TALENs) are one of the most prevalent SSNs and have a potential to provide higher target specificity by their dimeric property, TALENs are sensitive to methylated cytosines that are present not only in transposons but also in active genes in plants. In mammalian cells, the methylation sensitivity of TALENs could be overcome by using a base-recognition module (N

Indexed as

DNA methylationgenome editingmethylcytosine-recognition modulericeTALENs

Identifiers

PMID28348570
PMCPMC5346537
OpenAlexW2592254102

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.