Evidence map›Paper›PMID 28348484›Full record

ArticleWorld journal of gastroenterology2017

Integrated analysis of microRNA and mRNA expression profiles in HBx-expressing hepatic cells.

Ruo-Chan Chen, Juan Wang, Xu-Yuan Kuang, Fang Peng, Yong-Ming Fu, Yan Huang, Ning Li, Xue-Gong Fan

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ruo-Chan ChenRuo-Chan Chen, Juan Wang, Yong-Ming Fu, Yan Huang, Xue-Gong Fan, Hunan Key Laboratory of Viral Hepatitis, Department of Infectious Disease, Xiangya Hospital, Central South University, Changsha 410008, Hunan Province, China.
Juan WangRuo-Chan Chen, Juan Wang, Yong-Ming Fu, Yan Huang, Xue-Gong Fan, Hunan Key Laboratory of Viral Hepatitis, Department of Infectious Disease, Xiangya Hospital, Central South University, Changsha 410008, Hunan Province, China.
Xu-Yuan KuangRuo-Chan Chen, Juan Wang, Yong-Ming Fu, Yan Huang, Xue-Gong Fan, Hunan Key Laboratory of Viral Hepatitis, Department of Infectious Disease, Xiangya Hospital, Central South University, Changsha 410008, Hunan Province, China.
Fang PengRuo-Chan Chen, Juan Wang, Yong-Ming Fu, Yan Huang, Xue-Gong Fan, Hunan Key Laboratory of Viral Hepatitis, Department of Infectious Disease, Xiangya Hospital, Central South University, Changsha 410008, Hunan Province, China.
Yong-Ming FuRuo-Chan Chen, Juan Wang, Yong-Ming Fu, Yan Huang, Xue-Gong Fan, Hunan Key Laboratory of Viral Hepatitis, Department of Infectious Disease, Xiangya Hospital, Central South University, Changsha 410008, Hunan Province, China.
Yan HuangRuo-Chan Chen, Juan Wang, Yong-Ming Fu, Yan Huang, Xue-Gong Fan, Hunan Key Laboratory of Viral Hepatitis, Department of Infectious Disease, Xiangya Hospital, Central South University, Changsha 410008, Hunan Province, China.
Ning LiRuo-Chan Chen, Juan Wang, Yong-Ming Fu, Yan Huang, Xue-Gong Fan, Hunan Key Laboratory of Viral Hepatitis, Department of Infectious Disease, Xiangya Hospital, Central South University, Changsha 410008, Hunan Province, China.
Xue-Gong FanRuo-Chan Chen, Juan Wang, Yong-Ming Fu, Yan Huang, Xue-Gong Fan, Hunan Key Laboratory of Viral Hepatitis, Department of Infectious Disease, Xiangya Hospital, Central South University, Changsha 410008, Hunan Province, China.
Central South University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo identify the miRNA-mRNA regulatory network in hepatitis B virus X (HBx)-expressing hepatic cells.

methodsA stable HBx-expressing human liver cell line L02 was established. The mRNA and miRNA expression profiles of L02/HBx and L02/pcDNA liver cells were identified by RNA-sequencing analysis. Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis was performed to investigate the function of candidate biomarkers, and the relationship between miRNA and mRNA was studied by network analysis.

resultsCompared with L02/pcDNA cells, 742 unregulated genes and 501 downregulated genes were determined as differentially expressed in L02/HBx cells. Gene ontology analysis suggested that the differentially expressed genes were relevant to different biological processes. Concurrently, 22 differential miRNAs were also determined in L02/HBx cells. Furthermore, integrated analysis of miRNA and mRNA expression profiles identified a core miRNA-mRNA regulatory network that is correlated with the carcinogenic role of HBx.

conclusionCollectively, the miRNA-mRNA network-based analysis could be useful to elucidate the potential role of HBx in liver cell malignant transformation and shed light on the underlying molecular mechanism and novel therapy targets for hepatocellular carcinoma.

Indexed as

ApoptosisBiomarkers, TumorCarcinoma, HepatocellularCell LineCell MovementCell ProliferationGene Expression ProfilingHepatitis B virusHepatocytesHumansLiverLiver NeoplasmsMicroRNAsMolecular Targeted TherapyNeoplasm InvasivenessReal-Time Polymerase Chain ReactionBiomarkers, Tumorhepatitis B virus X proteinMicroRNAsRNA, MessengerTrans-ActivatorsViral Regulatory and Accessory ProteinsHepatitis B virus X proteinHepatocellular carcinomamiRNAmiRNA-mRNA networkmRNA

Identifiers

PMID28348484
PMCPMC5352919
OpenAlexW2596267085

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.