Evidence map›Paper›PMID 28346496›Full record

ArticlePLoS genetics2017

Overlapping SETBP1 gain-of-function mutations in Schinzel-Giedion syndrome and hematologic malignancies.

Rocio Acuna-Hidalgo, Pelagia Deriziotis, Marloes Steehouwer, Christian Gilissen, Sarah A Graham, Sipko van Dam, Julie Hoover-Fong, Aida B Telegrafi, Anne Destree, Robert Smigiel and 36 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 70 citations in OpenAlex.

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  18. The impact of SETBP1 mutations in neurological diseases and cancer.Genes to cells : devoted to molecular & cellular mechanisms · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

46 authors at 20 institutions in 14 countries.

Rocio Acuna-HidalgoDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID 0000-0001-9413-0348
Pelagia DeriziotisLanguage and Genetics Department, Max Planck Institute for Psycholinguistics, Nijmegen, The Netherlands.
Marloes SteehouwerDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.
Christian GilissenDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.
Sarah A GrahamLanguage and Genetics Department, Max Planck Institute for Psycholinguistics, Nijmegen, The Netherlands.
Sipko van DamUniversity of Groningen, University Medical Center Groningen, Department of Genetics, Groningen, the Netherlands.ORCID 0000-0001-9204-0197
Julie Hoover-FongMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland, United States of America.
Aida B TelegrafiGeneDx, Gaithersburg, Maryland, United States of America.
Anne DestreeInstitute of Pathology and Genetics (IPG), Gosselies, Belgium.
Robert SmigielDepartment of Pediatrics and Rare Disorders, Medical University, Wroclaw, Poland.
Lindsday A LambieDivision of Human Genetics, National Health Laboratory Service and School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Hülya KayseriliMedical Genetics Department, Koç University School of Medicine (KUSOM), İstanbul, Turkey.
Umut AltunogluMedical Genetics Department, İstanbul Medical Faculty, İstanbul University, İstanbul, Turkey.
Elisabetta LapiMedical Genetics Unit, Anna Meyer Children's University Hospital, Florence, Italy.
Maria Luisa UzielliUniversity of Florence, Genetic Science, Firenze, Italy.
Mariana AracenaDivisión de Pediatría, Pontificia Universidad Católica de Chile and Unidad de Genética, Hospital Dr. Luis Calvo Mackenna, Santiago Chile.
Banu G NurDepartment of Pediatric Genetics, Akdeniz University Medical School, Antalya, Turkey.
Ercan MihciDepartment of Pediatric Genetics, Akdeniz University Medical School, Antalya, Turkey.
Lilia M A MoreiraLaboratory of Human Genetics, Biology Institute, Federal University of Bahia (UFBA), Bahia, Brazil.
Viviane Borges FerreiraHospital Santa Izabel, Salvador-Bahia, Brazil.
Dafne D G HorovitzCERES-Genetica Reference Center and Studies in Medical Genetics and Instituto Fernandes Figueira / Fiocruz, Rio de Janeiro, Brazil.
Katia M da RochaCenter for Human Genome Studies, Institute of Biosciences, USP, Sao Paulo, Brazil.
Aleksandra Jezela-StanekDepartment of Medical Genetics, Children's Memorial Health Institute, Warsaw, Poland.
Alice S BrooksDepartment of Clinical Genetics, Sophia Children's Hospital, Erasmus MC, Rotterdam, The Netherlands.
Heiko ReutterInstitute of Human Genetics, University of Bonn, Bonn, Germany and Department of Neonatology and Pediatric Intensive Care, Children's Hospital, University of Bonn, Bonn, Germany.
Julie S CohenDivision of Neurogenetics, Kennedy Krieger Institute, Departments of Neurology and Pediatrics, The Johns Hopkins Hospital, Baltimore, Maryland, United States of America.
Ali FatemiDivision of Neurogenetics, Kennedy Krieger Institute, Departments of Neurology and Pediatrics, The Johns Hopkins Hospital, Baltimore, Maryland, United States of America.
Martin SmitkaAbteilung Neuropädiatrie, Medizinische Fakultät Carl Gustav Carus, Technische Universität Dresden, Germany.
Theresa A GrebeDivision of Genetics & Metabolism, Phoenix Children's Hospital, Phoenix, Arizona, United States of America.
Nataliya Di DonatoInstitute for Clinical Genetics, TU Dresden, Dresden, Germany.
Charu DeshpandeDepartment of Genetics, Guy's and St. Thomas' NHS Foundation Trust, London, United Kingdom.
Anthony VandersteenNorth West Thames Regional Genetics Unit, Kennedy Galton Centre, North West London Hospitals NHS Trust, Northwick Park & St Marks Hospital, Harrow, Middlesex, United Kingdom.
Charles Marques LourençoNeurogenetics Unit, Department of Medical Genetics School of Medicine of Ribeirao Preto, University of Sao Paulo, Sao Paulo, Brazil.
Andreas DufkeInstitute of Medical Genetics and Applied Genomics, University of Tübingen, Tübingen, Germany.
Eva RossierInstitute of Medical Genetics and Applied Genomics, University of Tübingen, Tübingen, Germany.
Gwenaelle AndreUnité de foetopathologie, Hôpital Pellegrin, Place Amélie Raba Léon, Bordeaux, France.
Alessandra BaumerInstitute of Medical Genetics, University of Zurich, Schlieren, Switzerland.
Careni SpencerDivision of Human Genetics, National Health Laboratory Service and School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Julie McGaughranGenetic Health Queensland, Royal Brisbane and Women's Hospital, Brisbane, Queensland and School of Medicine, The University of Queensland, Brisbane, Queensland, Australia.
Lude FrankeUniversity of Groningen, University Medical Center Groningen, Department of Genetics, Groningen, the Netherlands.
Joris A VeltmanDepartment of Human Genetics, Donders Centre for Neuroscience, Radboud University Medical Center, Nijmegen, The Netherlands.
Bert B A De VriesDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.
Albert SchinzelInstitute of Medical Genetics, University of Zurich, Schlieren, Switzerland.
Simon E FisherLanguage and Genetics Department, Max Planck Institute for Psycholinguistics, Nijmegen, The Netherlands.
Alexander HoischenDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.
Bregje W van BonDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID 0000-0003-2234-0105
Radboud University Nijmegen · NLAkdeniz University · TRKennedy Krieger Institute · USMax Planck Institute for Psycholinguistics · NLNational Health Laboratory Service · ZAUniversity Medical Center Groningen · NLUniversity of Tübingen · DEUniversity of Zurich · CHChildren's Memorial Health Institute · PLErasmus MC - Sophia Children’s Hospital · NLFundação Oswaldo Cruz · BRGuy's and St Thomas' NHS Foundation Trust · GBHôpital Pellegrin · FRHospital Santa Izabel · BRInstitute of Pathology and Genetics · BEIstanbul University · TRJohns Hopkins University · USKoç University · TRLondon North West Healthcare NHS Trust · GBMeyer Children's Hospital · IT

Funding

European Research Council 637640
6 · The paper itself

Abstract

Schinzel-Giedion syndrome (SGS) is a rare developmental disorder characterized by multiple malformations, severe neurological alterations and increased risk of malignancy. SGS is caused by de novo germline mutations clustering to a 12bp hotspot in exon 4 of SETBP1. Mutations in this hotspot disrupt a degron, a signal for the regulation of protein degradation, and lead to the accumulation of SETBP1 protein. Overlapping SETBP1 hotspot mutations have been observed recurrently as somatic events in leukemia. We collected clinical information of 47 SGS patients (including 26 novel cases) with germline SETBP1 mutations and of four individuals with a milder phenotype caused by de novo germline mutations adjacent to the SETBP1 hotspot. Different mutations within and around the SETBP1 hotspot have varying effects on SETBP1 stability and protein levels in vitro and in in silico modeling. Substitutions in SETBP1 residue I871 result in a weak increase in protein levels and mutations affecting this residue are significantly more frequent in SGS than in leukemia. On the other hand, substitutions in residue D868 lead to the largest increase in protein levels. Individuals with germline mutations affecting D868 have enhanced cell proliferation in vitro and higher incidence of cancer compared to patients with other germline SETBP1 mutations. Our findings substantiate that, despite their overlap, somatic SETBP1 mutations driving malignancy are more disruptive to the degron than germline SETBP1 mutations causing SGS. Additionally, this suggests that the functional threshold for the development of cancer driven by the disruption of the SETBP1 degron is higher than for the alteration in prenatal development in SGS. Drawing on previous studies of somatic SETBP1 mutations in leukemia, our results reveal a genotype-phenotype correlation in germline SETBP1 mutations spanning a molecular, cellular and clinical phenotype.

Indexed as

MutationAbnormalities, MultipleBlotting, WesternCarrier ProteinsCell LineCell ProliferationCell Transformation, NeoplasticChildChild, PreschoolCraniofacial AbnormalitiesFemaleGene Expression ProfilingGenetic Association StudiesGenetic Predisposition to DiseaseGerm-Line MutationHand Deformities, CongenitalCarrier ProteinsNuclear ProteinsSETBP1 protein, human

Identifiers

PMID28346496
PMCPMC5386295
OpenAlexW2601752826

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.