Evidence map›Paper›PMID 28346407›Full record

ArticleNature chemical biology2017

Insights into activity and inhibition from the crystal structure of human O-GlcNAcase.

Nathaniel L Elsen, Sangita B Patel, Rachael E Ford, Dawn L Hall, Fred Hess, Hari Kandula, Maria Kornienko, John Reid, Harold Selnick, Jennifer M Shipman and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. HumanResearch square · 2025
    Article
  6. Article
  7. Ultradeep O-GlcNAc proteomics reveals widespread O-GlcNAcylation on tyrosine residues of proteins.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Review
  9. Article
  10. OGT and OGA: Sweet guardians of the genome.The Journal of biological chemistry · 2024
    Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. HumanACS catalysis · 2023
    Article
  16. Review
  17. Review
  18. Cancers · 2022
    Review
  19. Cells · 2022
    Review
  20. Targeting ProteinCells · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Nathaniel L ElsenScreening and Protein Sciences, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Sangita B PatelStructural Chemistry, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Rachael E FordScreening and Protein Sciences, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Dawn L HallScreening and Protein Sciences, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Fred HessDepartment of Neurobiology, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Hari KandulaScreening and Protein Sciences, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Maria KornienkoScreening and Protein Sciences, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
John ReidStructural Chemistry, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Harold SelnickDiscovery Chemistry, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Jennifer M ShipmanScreening and Protein Sciences, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Sujata SharmaScreening and Protein Sciences, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Kevin J LumbScreening and Protein Sciences, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Stephen M SoissonStructural Chemistry, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.
Daniel J KleinStructural Chemistry, MRL, Merck &Co., Inc., West Point, Pennsylvania, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

O-GlcNAc hydrolase (OGA) catalyzes removal of βα-linked N-acetyl-D-glucosamine from serine and threonine residues. We report crystal structures of Homo sapiens OGA catalytic domain in apo and inhibited states, revealing a flexible dimer that displays three unique conformations and is characterized by subdomain α-helix swapping. These results identify new structural features of the substrate-binding groove adjacent to the catalytic site and open new opportunities for structural, mechanistic and drug discovery activities.

Indexed as

Models, BiologicalAcetylglucosaminebeta-N-AcetylhexosaminidasesBinding SitesCalorimetryCatalytic DomainCrystallography, X-RayEnzyme ActivationEnzyme InhibitorsHumansProtein Structure, TertiarySubstrate SpecificityAcetylglucosaminebeta-N-AcetylhexosaminidasesEnzyme Inhibitorshexosaminidase C

Identifiers

PMID28346407

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.