Evidence map›Paper›PMID 28346370›Full record

ArticleInternational journal of molecular sciences2017

De Novo Assembly, Annotation, and Characterization of Root Transcriptomes of Three Caladium Cultivars with a Focus on Necrotrophic Pathogen Resistance/Defense-Related Genes.

Zhe Cao, Zhanao Deng

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Plants as Sources of Anti-Inflammatory Agents.Molecules (Basel, Switzerland) · 2020
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. PeerJ · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Zhe CaoGulf Coast Research and Education Center, Department of Environmental Horticulture, IFAS, University of Florida, 14625 County Road 672, Wimauma, FL 33598, USA. cjun01@gmail.com.
Zhanao DengGulf Coast Research and Education Center, Department of Environmental Horticulture, IFAS, University of Florida, 14625 County Road 672, Wimauma, FL 33598, USA. zdeng@ufl.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Roots are vital to plant survival and crop yield, yet few efforts have been made to characterize the expressed genes in the roots of non-model plants (root transcriptomes). This study was conducted to sequence, assemble, annotate, and characterize the root transcriptomes of three caladium cultivars (

Indexed as

TranscriptomeAraceaeContig MappingDatabases, GeneticDisease ResistanceMicrosatellite RepeatsOpen Reading FramesPlant ProteinsPlant RootsPolymorphism, Single NucleotidePythiumQuantitative Trait LociRNA, PlantSequence Analysis, RNAPlant ProteinsRNA, PlantaroidCaladiumdefense-related genede novo assemblydisease resistance geneRNA-Seqroot transcriptome

Identifiers

PMID28346370
PMCPMC5412298

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.