Evidence map›Paper›PMID 28346138›Full record

ArticleeLife2017

Dilation of fusion pores by crowding of SNARE proteins.

Zhenyong Wu, Oscar D Bello, Sathish Thiyagarajan, Sarah Marie Auclair, Wensi Vennekate, Shyam S Krishnakumar, Ben O'Shaughnessy, Erdem Karatekin

Abstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Energetics, kinetics, and pathways of SNARE assembly in membrane fusion.Critical reviews in biochemistry and molecular biology · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhenyong WuDepartment of Cellular and Molecular Physiology, School of Medicine, Yale University, New Haven, United States.
Oscar D BelloNanobiology Institute, Yale University, West Haven, United States.
Sathish ThiyagarajanDepartment of Physics, Columbia University, New York, United States.ORCID 0000-0001-8545-8886
Sarah Marie AuclairNanobiology Institute, Yale University, West Haven, United States.
Wensi VennekateDepartment of Cellular and Molecular Physiology, School of Medicine, Yale University, New Haven, United States.
Shyam S KrishnakumarNanobiology Institute, Yale University, West Haven, United States.ORCID 0000-0001-6148-3251
Ben O'ShaughnessyDepartment of Chemical Engineering, Columbia University, New York, United States.
Erdem KaratekinDepartment of Cellular and Molecular Physiology, School of Medicine, Yale University, New Haven, United States.ORCID 0000-0002-5934-8728

Funding

Regulation of Membrane Fusion in ExocytosisR01DK027044 · NIDDK · YALE UNIVERSITY · PI KRISHNAKUMAR, SHYAM S · 1986 to 2021
$8.2M
Nucleation and dynamics of exocytotic fusion poresR01GM108954 · NIGMS · YALE UNIVERSITY · PI KARATEKIN, ERDEM · 2014 to 2018
$1.6M
NIDDK NIH HHS R01 DK027044NIGMS NIH HHS R01 GM108954
6 · The paper itself

Abstract

Hormones and neurotransmitters are released through fluctuating exocytotic fusion pores that can flicker open and shut multiple times. Cargo release and vesicle recycling depend on the fate of the pore, which may reseal or dilate irreversibly. Pore nucleation requires zippering between vesicle-associated v-SNAREs and target membrane t-SNAREs, but the mechanisms governing the subsequent pore dilation are not understood. Here, we probed the dilation of single fusion pores using v-SNARE-reconstituted ~23-nm-diameter discoidal nanolipoprotein particles (vNLPs) as fusion partners with cells ectopically expressing cognate, 'flipped' t-SNAREs. Pore nucleation required a minimum of two v-SNAREs per NLP face, and further increases in v-SNARE copy numbers did not affect nucleation rate. By contrast, the probability of pore dilation increased with increasing v-SNARE copies and was far from saturating at 15 v-SNARE copies per face, the NLP capacity. Our experimental and computational results suggest that SNARE availability may be pivotal in determining whether neurotransmitters or hormones are released through a transient ('kiss and run') or an irreversibly dilating pore (full fusion).

Indexed as

ExocytosisHeLa CellsHormonesHumansNeurotransmitter AgentsSecretory VesiclesSNARE ProteinsHormonesNeurotransmitter AgentsSNARE Proteinsbiophysicscell biologyE. coliexocytosisfusion poremembrane fusionprotein crowdingSNARE proteinsstructural biology

Identifiers

PMID28346138
PMCPMC5404929

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.