Evidence map›Paper›PMID 28345955›Full record

ArticleAmerican journal of respiratory and critical care medicine2017

Smoking-Dependent Distal-to-Proximal Repatterning of the Adult Human Small Airway Epithelium.

Jing Yang, Wu-Lin Zuo, Tomoya Fukui, IonWa Chao, Kazunori Gomi, Busub Lee, Michelle R Staudt, Robert J Kaner, Yael Strulovici-Barel, Jacqueline Salit and 2 more

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed, 1 pooled it
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 1 synthesis or guideline pooled it, 91 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Upper and Lower Respiratory Tract Compartmentalization in Pediatric Stem Cell Transplantation.American journal of respiratory cell and molecular biology · 2026
    Article
  4. Article
  5. Airway epithelial heterogeneity and mucus plugging in asthmatic bronchioles.American journal of respiratory and critical care medicine · 2026
    Article
  6. When asthmatic distal airways lose their identity: a new mechanism of mucus plugs pathogenesis.American journal of respiratory and critical care medicine · 2026
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Lung Immune Cell Niches and the Discovery of New Cell Subtypes.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Review
  15. A novelThe European respiratory journal · 2024
    Article
  16. Unveiling mechanisms of lung aging in COPD: A promising target for therapeutics development.Chinese medical journal pulmonary and critical care medicine · 2024
    Review
  17. Review
  18. Review
  19. Article
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Jing Yang1 Department of Genetic Medicine and.
Wu-Lin Zuo1 Department of Genetic Medicine and.
Tomoya Fukui1 Department of Genetic Medicine and.
IonWa Chao1 Department of Genetic Medicine and.
Kazunori Gomi3 Department of Medicine, Weill Cornell Medical College, New York, New York; and.
Busub Lee3 Department of Medicine, Weill Cornell Medical College, New York, New York; and.
Michelle R Staudt1 Department of Genetic Medicine and.
Robert J Kaner1 Department of Genetic Medicine and.
Yael Strulovici-Barel1 Department of Genetic Medicine and.
Jacqueline Salit1 Department of Genetic Medicine and.
Ronald G Crystal1 Department of Genetic Medicine and.
Renat Shaykhiev1 Department of Genetic Medicine and.
Genetic Technologies (Australia) · AUCornell University · USSichuan University · CN

Funding

Disparities in COVID Disease Severity and Outcomes in New York CityUL1TR002384 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI JULIANNE L IMPERATO-MCGINLEY · 2017 to 2026
$86.2M
Clinical and Translational Science CenterUL1TR000457 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI IMPERATO-MCGINLEY, JULIANNE L · 2012 to 2016
$46.0M
Overlapping Airway Basal Cell Transcriptome Reprogramming in COPD and Lung CancerR01HL107882 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CRYSTAL, RONALD G · 2011 to 2014
$5.8M
Integrative-omics Network Model of the Disordered COPD Small Airway EpitheliumR01HL118541 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CRYSTAL, RONALD G, MEZEY, JASON G · 2014 to 2017
$3.9M
Defective FGFR2 Signaling in the Small Airway Basal Progenitor Cells in COPDR01HL123544 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI SHAYKHIEV, RENAT · 2015 to 2019
$2.1M
Amphiregulin-driven COPD-relevant Remodeling of Human Airway EpitheliumR01HL127393 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI SHAYKHIEV, RENAT · 2016 to 2019
$1.7M
NCATS NIH HHS UL1 TR000457NCATS NIH HHS UL1 TR002384NHLBI NIH HHS R01 HL107882NHLBI NIH HHS R01 HL118541NHLBI NIH HHS R01 HL123544NHLBI NIH HHS R01 HL127393
6 · The paper itself

Abstract

rationaleSmall airways are the primary site of pathologic changes in chronic obstructive pulmonary disease (COPD), the major smoking-induced lung disorder.

objectivesOn the basis of the concept of proximal-distal patterning that determines regional specialization of the airway epithelium during lung development, we hypothesized that a similar program operates in the adult human lung being altered by smoking, leading to decreased regional identity of the small airway epithelium (SAE).

methodsThe proximal and distal airway signatures were identified by comparing the transcriptomes of large and small airway epithelium samples obtained by bronchoscopy from healthy nonsmokers. The expression of these signatures was evaluated in the SAE of healthy smokers and smokers with COPD compared with that of healthy nonsmokers. The capacity of airway basal stem cells (BCs) to maintain region-associated phenotypes was evaluated using the air-liquid interface model. MEASUREMENTS AND MAIN

resultsThe distal and proximal airway signatures, containing 134 and 233 genes, respectively, were identified. These signatures included known developmental regulators of airway patterning, as well as novel regulators such as epidermal growth factor receptor, which was associated with the proximal airway phenotype. In the SAE of smokers with COPD, there was a dramatic smoking-dependent loss of the regional transcriptome identity with concomitant proximalization. This repatterning phenotype was reproduced by stimulating SAE BCs with epidermal growth factor, which was up-regulated in the SAE of smokers, during differentiation of SAE BCs in vitro.

conclusionsSmoking-induced global distal-to-proximal reprogramming of the SAE represents a novel pathologic feature of COPD and is mediated by exaggerated epidermal growth factor/epidermal growth factor receptor signaling in SAE BCs.

Indexed as

AdultEpitheliumFemaleHumansLungMalePulmonary Disease, Chronic ObstructiveSmokingbasal cellschronic obstructive pulmonary diseasedifferentiationstem cellstranscriptome

Identifiers

PMID28345955
PMCPMC5549864
OpenAlexW2598516749

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.