Evidence map›Paper›PMID 28345263›Full record

ArticleProtein science : a publication of the Protein Society2017

NMR solution structure of the RED subdomain of the Sleeping Beauty transposase.

Tatiana A Konnova, Christopher M Singer, Irina V Nesmelova

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact, top 98% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. A novel hyperactive variant of theMolecular therapy. Nucleic acids · 2024
    Article
  2. Review
  3. Jumping Ahead withViruses · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tatiana A KonnovaDepartment of Physics and Optical Science, University of North Carolina, Charlotte, North Carolina, 28223.
Christopher M SingerDepartment of Physics and Optical Science, University of North Carolina, Charlotte, North Carolina, 28223.
Irina V NesmelovaDepartment of Physics and Optical Science, University of North Carolina, Charlotte, North Carolina, 28223.ORCID 0000-0002-1835-1533
University of North Carolina at Charlotte · US

Funding

Structural studies of Sleeping Beauty transposaseR15GM112076 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI NESMELOVA, IRINA V · 2014 to 2014
$327k
NIGMS NIH HHS R15 GM112076
6 · The paper itself

Abstract

DNA transposons can be employed for stable gene transfer in vertebrates. The Sleeping Beauty (SB) DNA transposon has been recently adapted for human application and is being evaluated in clinical trials, however its molecular mechanism is not clear. SB transposition is catalyzed by the transposase enzyme, which is a multi-domain protein containing the catalytic and the DNA-binding domains. The DNA-binding domain of the SB transposase contains two structurally independent subdomains, PAI and RED. Recently, the structures of the catalytic domain and the PAI subdomain have been determined, however no structural information on the RED subdomain and its interactions with DNA has been available. Here, we used NMR spectroscopy to determine the solution structure of the RED subdomain and characterize its interactions with the transposon DNA.

Indexed as

DNA Transposable ElementsCatalysisDNAHumansNuclear Magnetic Resonance, BiomolecularProtein DomainsTransposasesDNADNA Transposable Elementssleeping beauty transposase, humanTransposasesDNA bindingfoldingNMR spectroscopyRED subdomainSB transposasestructure

Identifiers

PMID28345263
PMCPMC5441430
OpenAlexW2599425797

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.