Evidence map›Paper›PMID 28343629›Full record

ArticleAmerican journal of human genetics2017

Biallelic Variants in OTUD6B Cause an Intellectual Disability Syndrome Associated with Seizures and Dysmorphic Features.

Teresa Santiago-Sim, Lindsay C Burrage, Frédéric Ebstein, Mari J Tokita, Marcus Miller, Weimin Bi, Alicia A Braxton, Jill A Rosenfeld, Maher Shahrour, Andrea Lehmann and 34 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. OTU deubiquitinases in disease: roles and targeting.Trends in molecular medicine · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Biallelic USP14 variants cause a syndromic neurodevelopmental disorder.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Article
  9. Article
  10. Life science alliance · 2024
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. A New Family with a NovelMolecular syndromology · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

44 authors at 18 institutions in 10 countries.

Teresa Santiago-SimDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Miraca Genetics Laboratories, Baylor College of Medicine, Houston, TX 77021, USA.
Lindsay C BurrageDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA.
Frédéric EbsteinCharité-Universitätsmedizin Berlin, Institute of Biochemistry, Charité Platz 1/Virchowweg 6, 10117 Berlin, Germany.
Mari J TokitaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Miraca Genetics Laboratories, Baylor College of Medicine, Houston, TX 77021, USA.
Marcus MillerDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Miraca Genetics Laboratories, Baylor College of Medicine, Houston, TX 77021, USA.
Weimin BiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Miraca Genetics Laboratories, Baylor College of Medicine, Houston, TX 77021, USA.
Alicia A BraxtonDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Miraca Genetics Laboratories, Baylor College of Medicine, Houston, TX 77021, USA.
Jill A RosenfeldDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Maher ShahrourDepartment of Pediatrics and Genetics, Makassed Hospital and Al-Quds University, Jerusalem 91220, Palestine.
Andrea LehmannCharité-Universitätsmedizin Berlin, Institute of Biochemistry, Charité Platz 1/Virchowweg 6, 10117 Berlin, Germany.
Benjamin CognéCHU de Nantes, Service de Génétique Médicale, Nantes Cedex 1 44093, France.
Sébastien KüryCHU de Nantes, Service de Génétique Médicale, Nantes Cedex 1 44093, France.
Thomas BesnardCHU de Nantes, Service de Génétique Médicale, Nantes Cedex 1 44093, France.
Bertrand IsidorCHU de Nantes, Service de Génétique Médicale, Nantes Cedex 1 44093, France; INSERM, UMR-S 957, 1 Rue Gaston Veil, Nantes 44035, France.
Stéphane BézieauCHU de Nantes, Service de Génétique Médicale, Nantes Cedex 1 44093, France.
Isabelle HazartCHU de Nantes, Service de Pédiatrie, Nantes Cedex 1 44093, France.
Honey NagakuraSpecially for Children, Austin, TX 78723, USA.
LaDonna L ImmkenSpecially for Children, Austin, TX 78723, USA.
Rebecca O LittlejohnDepartment of Pediatrics, Baylor College of Medicine, San Antonio, TX 78207, USA.
Elizabeth RoederDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Department of Pediatrics, Baylor College of Medicine, San Antonio, TX 78207, USA.
EuroEPINOMICS RES Consortium Autosomal Recessive working group, S. Hande CaglayanDepartment of Molecular Biology and Genetics, Bogazici University, Istanbul 34342, Turkey.
Bulent KaraDepartment of Pediatrics, Kocaeli University Medical Faculty, Kocaeli 41380, Turkey.
Katia HardiesNeurogenetics Group, Center of Molecular Neurology, VIB, Antwerp 2610, Belgium; Laboratory of Neurogenetics, Institute Born-Bunge, University of Antwerp, Antwerp 2610, Belgium.
Sarah WeckhuysenNeurogenetics Group, Center of Molecular Neurology, VIB, Antwerp 2610, Belgium; Laboratory of Neurogenetics, Institute Born-Bunge, University of Antwerp, Antwerp 2610, Belgium; Division of Neurology, Antwerp University Hospital, Antwerp 2610, Belgium.
Patrick MayLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur-Alzette 4362, Luxembourg.
Johannes R LemkeInstitute of Human Genetics, University of Leipzig Hospitals and Clinics, 04103 Leipzig, Germany.
Orly ElpelegMonique and Jacques Roboh Department of Genetic Research, Hadassah-Hebrew University Medical Center, Jerusalem 91120, Israel.
Bassam Abu-LibdehDepartment of Pediatrics and Genetics, Makassed Hospital and Al-Quds University, Jerusalem 91220, Palestine.
Kiely N JamesLaboratory for Pediatric Brain Disease, Howard Hughes Medical Institute, Department of Neurosciences, University of California, San Diego, CA 92093, USA.
Jennifer L SilhavyLaboratory for Pediatric Brain Disease, Howard Hughes Medical Institute, Department of Neurosciences, University of California, San Diego, CA 92093, USA.
Mahmoud Y IssaClinical Genetics Department, Human Genetics and Genome Research Division, National Research Centre, Cairo 12311, Egypt.
Maha S ZakiClinical Genetics Department, Human Genetics and Genome Research Division, National Research Centre, Cairo 12311, Egypt.
Joseph G GleesonLaboratory for Pediatric Brain Disease, Howard Hughes Medical Institute, Department of Neurosciences, University of California, San Diego, CA 92093, USA.
John R SeavittDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Mary E DickinsonDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, TX 77030, USA.
M Cecilia LjungbergThe Jan and Dan Duncan Neurological Research Institute, Houston, TX 77030, USA; Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
Sara WellsMedical Research Council Harwell (Mammalian Genetics Unit and Mary Lyon Centre), Harwell, Oxfordshire OX11 0RD, UK.
Sara J JohnsonMedical Research Council Harwell (Mammalian Genetics Unit and Mary Lyon Centre), Harwell, Oxfordshire OX11 0RD, UK.
Lydia TeboulMedical Research Council Harwell (Mammalian Genetics Unit and Mary Lyon Centre), Harwell, Oxfordshire OX11 0RD, UK.
Christine M EngDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Miraca Genetics Laboratories, Baylor College of Medicine, Houston, TX 77021, USA.
Yaping YangDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Miraca Genetics Laboratories, Baylor College of Medicine, Houston, TX 77021, USA.
Peter-Michael KloetzelCharité-Universitätsmedizin Berlin, Institute of Biochemistry, Charité Platz 1/Virchowweg 6, 10117 Berlin, Germany; Berlin Institute of Health, 10117 Berlin, Germany.
Jason D HeaneyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: heaney@bcm.edu.
Magdalena A WalkiewiczDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Miraca Genetics Laboratories, Baylor College of Medicine, Houston, TX 77021, USA. Electronic address: mwalkiew@bcm.edu.
Baylor College of Medicine · USHoward Hughes Medical Institute · USCentre Hospitalier Universitaire de Nantes · FRMary Lyon Centre at MRC Harwell · GBNational Research Centre · EGAl-Quds University · PSBaylor Genetics · USBerlin Institute of Health at Charité - Universitätsmedizin Berlin · DECenter for Children · USCharité - Universitätsmedizin Berlin · DEHadassah Medical Center · ILKocaeli Üniversitesi · TRUniversity Hospital Leipzig · DEUniversity of Antwerp · BEUniversity of Luxembourg · LUVIB-UAntwerp Center for Molecular Neurology · BEInserm · FRNeurological Research Institute · US

Funding

UM1HG006348: Cas9 Genome Integrity Supplemental ProposalUM1HG006348 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI Jason D. Heaney, Chih-Wei Logan Hsu · 2016 to 2026
$47.5M
CRSPR II Supplement: Consortium for the production and cryopreservation of knockout miceU42OD011174 · OD · BAYLOR COLLEGE OF MEDICINE · PI BEAUDET, ARTHUR L. · 2012 to 2015
$17.7M
Consortium for Broad Based Disease Phenotyping of Knockout MiceU54HG006348 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI BEAUDET, ARTHUR L., PAYLOR, RICHARD E · 2011 to 2015
$17.0M
MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
Disordered Energy Metabolism in Argininosuccinate Lyase DeficiencyK08DK106453 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI BURRAGE, LINDSAY C · 2015 to 2018
$622k
Medical Research Council MC_UP_1502/3NHGRI NIH HHS U54 HG006348NHGRI NIH HHS UM1 HG006348NIDDK NIH HHS K08 DK106453NIGMS NIH HHS T32 GM007526NIH HHS U42 OD011174
6 · The paper itself

Abstract

Ubiquitination is a posttranslational modification that regulates many cellular processes including protein degradation, intracellular trafficking, cell signaling, and protein-protein interactions. Deubiquitinating enzymes (DUBs), which reverse the process of ubiquitination, are important regulators of the ubiquitin system. OTUD6B encodes a member of the ovarian tumor domain (OTU)-containing subfamily of deubiquitinating enzymes. Herein, we report biallelic pathogenic variants in OTUD6B in 12 individuals from 6 independent families with an intellectual disability syndrome associated with seizures and dysmorphic features. In subjects with predicted loss-of-function alleles, additional features include global developmental delay, microcephaly, absent speech, hypotonia, growth retardation with prenatal onset, feeding difficulties, structural brain abnormalities, congenital malformations including congenital heart disease, and musculoskeletal features. Homozygous Otud6b knockout mice were subviable, smaller in size, and had congenital heart defects, consistent with the severity of loss-of-function variants in humans. Analysis of peripheral blood mononuclear cells from an affected subject showed reduced incorporation of 19S subunits into 26S proteasomes, decreased chymotrypsin-like activity, and accumulation of ubiquitin-protein conjugates. Our findings suggest a role for OTUD6B in proteasome function, establish that defective OTUD6B function underlies a multisystemic human disorder, and provide additional evidence for the emerging relationship between the ubiquitin system and human disease.

Indexed as

Abnormalities, MultipleAdolescentAnimalsChildChild, PreschoolDisease Models, AnimalEndopeptidasesFemaleGene DeletionHumansIntellectual DisabilityMaleMicePedigreeProteasome Endopeptidase ComplexSeizuresEndopeptidasesOTUD6B protein, humanProteasome Endopeptidase Complex

Identifiers

PMID28343629
PMCPMC5384096
OpenAlexW2598294330

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.