Evidence map›Paper›PMID 28342043›Full record

ArticleJournal of digital imaging2017

Accuracy Validation of an Automated Method for Prostate Segmentation in Magnetic Resonance Imaging.

Maysam Shahedi, Derek W Cool, Glenn S Bauman, Matthew Bastian-Jordan, Aaron Fenster, Aaron D Ward

Open access · bronzeAbstract readValidation Study
In one paragraph

Article in Journal of digital imaging, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Maysam ShahediBaines Imaging Research Laboratory, London Regional Cancer Program, A3-123A, 790 Commissioners Rd E, London, ON, N6A 4L6, Canada. mshahedi@uwo.ca.ORCID http://orcid.org/0000-0001-9108-2010
Derek W CoolRobarts Research Institute, The University of Western Ontario, London, ON, Canada.
Glenn S BaumanBaines Imaging Research Laboratory, London Regional Cancer Program, A3-123A, 790 Commissioners Rd E, London, ON, N6A 4L6, Canada.
Matthew Bastian-JordanThe Department of Medical Imaging, The University of Western Ontario, London, ON, Canada.
Aaron FensterRobarts Research Institute, The University of Western Ontario, London, ON, Canada.
Aaron D WardBaines Imaging Research Laboratory, London Regional Cancer Program, A3-123A, 790 Commissioners Rd E, London, ON, N6A 4L6, Canada.
Western University · CA

Funding

Movember Foundation RS2015-04
6 · The paper itself

Abstract

Three dimensional (3D) manual segmentation of the prostate on magnetic resonance imaging (MRI) is a laborious and time-consuming task that is subject to inter-observer variability. In this study, we developed a fully automatic segmentation algorithm for T2-weighted endorectal prostate MRI and evaluated its accuracy within different regions of interest using a set of complementary error metrics. Our dataset contained 42 T2-weighted endorectal MRI from prostate cancer patients. The prostate was manually segmented by one observer on all of the images and by two other observers on a subset of 10 images. The algorithm first coarsely localizes the prostate in the image using a template matching technique. Then, it defines the prostate surface using learned shape and appearance information from a set of training images. To evaluate the algorithm, we assessed the error metric values in the context of measured inter-observer variability and compared performance to that of our previously published semi-automatic approach. The automatic algorithm needed an average execution time of ∼60 s to segment the prostate in 3D. When compared to a single-observer reference standard, the automatic algorithm has an average mean absolute distance of 2.8 mm, Dice similarity coefficient of 82%, recall of 82%, precision of 84%, and volume difference of 0.5 cm

Indexed as

AlgorithmsHumansImage Processing, Computer-AssistedImaging, Three-DimensionalMagnetic Resonance ImagingMaleObserver VariationPattern Recognition, AutomatedProstateProstatic NeoplasmsReproducibility of Results3D segmentationAutomatic segmentationEndorectal receive coilImage segmentationMagnetic resonance imagingValidation

Identifiers

PMID28342043
PMCPMC5681466
OpenAlexW2603342637

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.