Evidence map›Paper›PMID 28341772›Full record

ArticleGenome research2017

Diurnal regulation of RNA polymerase III transcription is under the control of both the feeding-fasting response and the circadian clock.

François Mange, Viviane Praz, Eugenia Migliavacca, Ian M Willis, Frédéric Schütz, Nouria Hernandez, CycliX Consortium

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Systematic analysis of differential rhythmic liver gene expression mediated by the circadian clock and feeding rhythms.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  9. Article
  10. Circadian regulation of c-MYC in mice.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Article
  12. Genome-wide circadian regulation: A unique system for computational biology.Computational and structural biotechnology journal · 2020
    Review
  13. Article
  14. Article
  15. Metabolic programming a lean phenotype by deregulation of RNA polymerase III.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  16. Article
  17. Review
  18. Cisplatin-DNA adduct repair of transcribed genes is controlled by two circadian programs in mouse tissues.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. What makes ribosomes tick?RNA biology · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

François MangeCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland.
Viviane PrazCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland.
Eugenia MigliavaccaCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland.
Ian M WillisDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Frédéric SchützCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland.
Nouria HernandezCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland.
CycliX Consortium
SIB Swiss Institute of Bioinformatics · CHUniversity of Lausanne · CHAlbert Einstein College of Medicine · US

Funding

RESEARCH TRAININGP30DK026687 · NIDDK · ST. LUKE'S-ROOSEVELT INST FOR HLTH SCIS · PI Anthony W Ferrante, DYMPNA GALLAGHER · 1986 to 2026
$33.0M
Special Animal CoreP30DK041296 · NIDDK · YESHIVA UNIVERSITY · PI WOLKOFF, ALLAN W · 1989 to 2018
$22.9M
MAF1 Function and Metabolic InefficiencyR01GM120358 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI WILLIS, IAN M · 2016 to 2019
$2.2M
NIDDK NIH HHS P30 DK026687NIDDK NIH HHS P30 DK041296NIGMS NIH HHS R01 GM120358
6 · The paper itself

Abstract

RNA polymerase III (Pol III) synthesizes short noncoding RNAs, many of which are essential for translation. Accordingly, Pol III activity is tightly regulated with cell growth and proliferation by factors such as MYC, RB1, TRP53, and MAF1. MAF1 is a repressor of Pol III transcription whose activity is controlled by phosphorylation; in particular, it is inactivated through phosphorylation by the TORC1 kinase complex, a sensor of nutrient availability. Pol III regulation is thus sensitive to environmental cues, yet a diurnal profile of Pol III transcription activity is so far lacking. Here, we first use gene expression arrays to measure mRNA accumulation during the diurnal cycle in the livers of (1) wild-type mice, (2) arrhythmic

Indexed as

Transcription, GeneticAnimalsARNTL Transcription FactorsCircadian ClocksCircadian RhythmEatingFastingGene Expression ProfilingGene Expression RegulationLiverMiceMice, KnockoutOligonucleotide Array Sequence AnalysisProtein BindingRepressor ProteinsRNA Polymerase IIIARNTL Transcription FactorsBmal1 protein, mouseMaf1 protein, mouseRepressor ProteinsRNA Polymerase III

Identifiers

PMID28341772
PMCPMC5453330
OpenAlexW2598191949

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.