Evidence map›Paper›PMID 28340351›Full record

ArticleCell2017

Bedside Back to Bench: Building Bridges between Basic and Clinical Genomic Research.

Teri A Manolio, Douglas M Fowler, Lea M Starita, Melissa A Haendel, Daniel G MacArthur, Leslie G Biesecker, Elizabeth Worthey, Rex L Chisholm, Eric D Green, Howard J Jacob and 21 more

Abstract read
In one paragraph

Article in Cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed.

  1. Trial
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. MVAR: A Mouse Variation Registry.Journal of molecular biology · 2024
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Characterization of the Testis-specificJournal of the Endocrine Society · 2021
    Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Teri A ManolioNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA. Electronic address: manolio@nih.gov.
Douglas M FowlerDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Lea M StaritaDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Melissa A HaendelDepartment of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, OR 97239, USA.
Daniel G MacArthurProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA 02114, USA.
Leslie G BieseckerNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Elizabeth WortheyHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Rex L ChisholmCenter for Genetic Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Eric D GreenNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Howard J JacobHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Howard L McLeodDeBartolo Family Personalized Medicine Institute, Moffitt Cancer Center, Tampa, FL 33612, USA.
Dan RodenDepartment of Medicine, Pharmacology, and Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN 37203, USA.
Laura Lyman RodriguezNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Marc S WilliamsGenomic Medicine Institute, Geisinger Health System, Danville, PA 17822, USA.
Gregory M CooperHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Nancy J CoxDivision of Genetic Medicine, Vanderbilt University Medical Center, Nashville, TN 37203, USA.
Gail E HermanInstitute for Genomic Medicine, The Research Institute at Nationwide Children's Hospital, Columbus, OH 43205, USA.
Stephen KingsmoreRady Children's Institute for Genomic Medicine, San Diego, CA 92123, USA.
Cecilia LoDepartment of Developmental Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 1526, USA.
Cathleen LutzRare and Orphan Disease Center, Jackson Laboratory for Mammalian Genetics, Bar Harbor, ME 04609, USA.
Calum A MacRaeDivisions of Cardiovascular Medicine, Network Medicine and Genetics, Brigham and Women's Hospital, Boston, MA 02115, USA.
Robert L NussbaumInvitae Genetics Information and Testing Company, San Francisco, CA 94107, USA.
Jose M OrdovasJM-USDA-Human Nutrition Research Center on Aging, Tufts University, Boston, MA 02111, USA.
Erin M RamosNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Peter N RobinsonThe Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Wendy S RubinsteinNational Center for Biotechnology Information, National Library of Medicine, NIH, Bethesda, MD 20892, USA.
Christine SeidmanDepartment of Medicine, Brigham and Women's Hospital, Boston, MA 02115, USA; Department of Genetics, Harvard Medical School, Boston, MA 02115, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA.
Barbara E StrangerSection of Genetic Medicine, Department of Medicine, Institute for Genomics and Systems Biology, Center for Data Intensive Science, University of Chicago, Chicago, IL 60637, USA.
Haoyi WangThe Jackson Laboratory for Mammalian Genetics, Bar Harbor, ME 04609, USA.
Monte WesterfieldDepartment of Biology, University of Oregon, Portland, OR 97403, USA.
Carol BultThe Jackson Laboratory for Mammalian Genetics, Bar Harbor, ME 04609, USA.

Funding

The Mutant Mouse Resource and Research Center at The Jackson LaboratoryU42OD010921 · OD · JACKSON LABORATORY · PI Cathleen M Lutz · 2012 to 2026
$21.4M
The Monarch Initiative: Linking Diseases to Model Organism ResourcesR24OD011883 · OD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HAENDEL, MELISSA A, MUNGALL, CHRISTOPHER J · 2012 to 2024
$16.0M
Genomic Diagnosis in Children with Developmental DelayUM1HG007301 · NHGRI · HUDSON-ALPHA INSTITUTE FOR BIOTECHNOLOGY · PI COOPER, GREGORY MICHAEL, MYERS, RICHARD M · 2013 to 2016
$7.5M
A Community Zebrafish Resource for Modeling GWAS BiologyR24OD017870 · OD · BRIGHAM AND WOMEN'S HOSPITAL · PI GOESSLING, WOLFRAM, MACRAE, CALUM A. · 2014 to 2021
$6.3M
Clinical Genome Wide Sequencing Core for the Undiagnosed Disease NetworkU01HG007943 · NHGRI · MEDICAL COLLEGE OF WISCONSIN · PI WORTHEY, ELIZABETH A · 2014 to 2017
$4.1M
Large-Scale Methods for Assessing the Consequences of Mutations in ProteinsR01GM109110 · NIGMS · UNIVERSITY OF WASHINGTON · PI FOWLER, DOUGLAS M · 2014 to 2021
$2.4M
F-CAP: Functionalization of Variants in Clinically Actionable PharmacogenesR24GM115277 · NIGMS · UNIVERSITY OF WASHINGTON · PI FOWLER, DOUGLAS M, RETTIE, ALLAN EDWARD · 2015 to 2017
$2.2M
Intramural NIH HHS Z99 HG999999NHGRI NIH HHS U01 HG007943NHGRI NIH HHS UM1 HG007301NIGMS NIH HHS R01 GM109110NIGMS NIH HHS R24 GM115277NIH HHS R24 OD011883NIH HHS R24 OD017870NIH HHS U42 OD010921
6 · The paper itself

Abstract

Genome sequencing has revolutionized the diagnosis of genetic diseases. Close collaborations between basic scientists and clinical genomicists are now needed to link genetic variants with disease causation. To facilitate such collaborations, we recommend prioritizing clinically relevant genes for functional studies, developing reference variant-phenotype databases, adopting phenotype description standards, and promoting data sharing.

Indexed as

Biomedical ResearchGenomicsAnimalsDatabases, GeneticDiseaseDNA Mutational AnalysisHuman Genome ProjectHumansInformation DisseminationModels, Animal

Identifiers

PMID28340351
PMCPMC5511379

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.