Evidence map›Paper›PMID 28338786›Full record

ArticleGenome biology and evolution2017

Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus.

Susan Murray, Ben Pascoe, Guillaume Méric, Leonardos Mageiros, Koji Yahara, Matthew D Hitchings, Yasmin Friedmann, Thomas S Wilkinson, Fraser J Gormley, Dietrich Mack and 10 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. CharacterizingmSystems · 2025
    Article
  4. Article
  5. Methicillin-sensitiveMicrobial genomics · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Genetic Complexity of CC5Pathogens (Basel, Switzerland) · 2024
    Article
  10. Article
  11. Article
  12. Virulence Mechanisms of Staphylococcal Animal Pathogens.International journal of molecular sciences · 2023
    Review
  13. Article
  14. Article
  15. Methicillin-ResistantVeterinary sciences · 2022
    Review
  16. Article
  17. Article
  18. Antimicrobial resistance in the globalized food chain: a One Health perspective applied to the poultry industry.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 5 countries.

Susan MurraySwansea University Medical School, Swansea University, United Kingdom.
Ben PascoeThe Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, United Kingdom.
Guillaume MéricThe Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, United Kingdom.
Leonardos MageirosSwansea University Medical School, Swansea University, United Kingdom.
Koji YaharaSwansea University Medical School, Swansea University, United Kingdom.
Matthew D HitchingsSwansea University Medical School, Swansea University, United Kingdom.
Yasmin FriedmannSwansea University Medical School, Swansea University, United Kingdom.
Thomas S WilkinsonSwansea University Medical School, Swansea University, United Kingdom.
Fraser J GormleyBrewdog PLC, Balmacassie Industrial Estate, Ellon, Aberdeenshire, United Kingdom.
Dietrich MackBioscientia Labor Ingelheim, Institut für Medizinische Diagnostik GmbH, Ingelheim, Germany.
James E BrayDepartment of Zoology, University of Oxford, United Kingdom.
Sarah LambleWellcome Trust Centre for Human Genetics, Oxford, United Kingdom.
Rory BowdenWellcome Trust Centre for Human Genetics, Oxford, United Kingdom.
Keith A JolleyDepartment of Zoology, University of Oxford, United Kingdom.
Martin C J MaidenDepartment of Zoology, University of Oxford, United Kingdom.
Sarah WendlandtInstitute of Farm Animal Genetics, Friedrich-Loeffler-Institut (FLI), Neustadt, Germany.
Stefan SchwarzInstitute of Farm Animal Genetics, Friedrich-Loeffler-Institut (FLI), Neustadt, Germany.
Jukka CoranderDepartment of Mathematics and Statistics, University of Helsinki, Finland.
J Ross FitzgeraldThe Roslin Institute and Centre for Infectious Diseases, University of Edinburgh, United Kingdom.
Samuel K SheppardThe Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, United Kingdom.
Swansea University · GBUniversity of Oxford · GBCentre for Human Genetics · GBFriedrich-Loeffler-Institut · DEUniversity of Bath · GBKurume University · JPRoslin Institute · GBUniversity of Oslo · NO

Funding

Biotechnology and Biological Sciences Research Council BB/I013873/1Biotechnology and Biological Sciences Research Council BB/I02464X/1Biotechnology and Biological Sciences Research Council BB/K00638X/1Medical Research Council G0801929Medical Research Council MR/L015080/1Wellcome Trust
6 · The paper itself

Abstract

Staphylococcus aureus are globally disseminated among farmed chickens causing skeletal muscle infections, dermatitis, and septicaemia. The emergence of poultry-associated lineages has involved zoonotic transmission from humans to chickens but questions remain about the specific adaptations that promote proliferation of chicken pathogens. We characterized genetic variation in a population of genome-sequenced S. aureus isolates of poultry and human origin. Genealogical analysis identified a dominant poultry-associated sequence cluster within the CC5 clonal complex. Poultry and human CC5 isolates were significantly distinct from each other and more recombination events were detected in the poultry isolates. We identified 44 recombination events in 33 genes along the branch extending to the poultry-specific CC5 cluster, and 47 genes were found more often in CC5 poultry isolates compared with those from humans. Many of these gene sequences were common in chicken isolates from other clonal complexes suggesting horizontal gene transfer among poultry associated lineages. Consistent with functional predictions for putative poultry-associated genes, poultry isolates showed enhanced growth at 42 °C and greater erythrocyte lysis on chicken blood agar in comparison with human isolates. By combining phenotype information with evolutionary analyses of staphylococcal genomes, we provide evidence of adaptation, following a human-to-poultry host transition. This has important implications for the emergence and dissemination of new pathogenic clones associated with modern agriculture.

Indexed as

Adaptation, PhysiologicalAnimalsChickensGene Transfer, HorizontalGenome, BacterialGenotypeHumansPoultry DiseasesSpecies SpecificityStaphylococcal InfectionsStaphylococcus aureusevolutiongenomicspoultry infectionrecombinationStaphylococcus

Identifiers

PMID28338786
PMCPMC5469444
OpenAlexW2526197687

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.