Evidence map›Paper›PMID 28338097›Full record

ArticleScientific reports2017

The cellular protein hnRNP A2/B1 enhances HIV-1 transcription by unfolding LTR promoter G-quadruplexes.

Matteo Scalabrin, Ilaria Frasson, Emanuela Ruggiero, Rosalba Perrone, Elena Tosoni, Sara Lago, Martina Tassinari, Giorgio Palù, Sara N Richter

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
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  4. Chronic RNA G-quadruplex Accumulation in Aging and Alzheimer's Disease.bioRxiv : the preprint server for biology · 2025
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  15. Targeting G-quadruplexes to achieve antiviral activity.Bioorganic & medicinal chemistry letters · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Matteo ScalabrinDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Ilaria FrassonDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Emanuela RuggieroDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Rosalba PerroneDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Elena TosoniDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Sara LagoDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Martina TassinariDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Giorgio PalùDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Sara N RichterDepartment of Molecular Medicine, University of Padua, Padua, Italy.
University of Padua · IT

Funding

European Research Council 615879
6 · The paper itself

Abstract

G-quadruplexes are four-stranded conformations of nucleic acids that act as cellular epigenetic regulators. A dynamic G-quadruplex forming region in the HIV-1 LTR promoter represses HIV-1 transcription when in the folded conformation. This activity is enhanced by nucleolin, which induces and stabilizes the HIV-1 LTR G-quadruplexes. In this work by a combined pull-down/mass spectrometry approach, we consistently found hnRNP A2/B1 as an additional LTR-G-quadruplex interacting protein. Surface plasmon resonance confirmed G-quadruplex specificity over linear sequences and fluorescence resonance energy transfer analysis indicated that hnRNP A2/B1 is able to efficiently unfold the LTR G-quadruplexes. Evaluation of the thermal stability of the LTR G-quadruplexes in different-length oligonucleotides showed that the protein is fit to be most active in the LTR full-length environment. When hnRNP A2/B1 was silenced in cells, LTR activity decreased, indicating that the protein acts as a HIV-1 transcription activator. Our data highlight a tightly regulated control of transcription based on G-quadruplex folding/unfolding, which depends on interacting cellular proteins. These findings provide a deeper understanding of the viral transcription mechanism and may pave the way to the development of drugs effective against the integrated HIV-1, present both in actively and latently infected cells.

Indexed as

G-QuadruplexesPromoter Regions, GeneticTerminal Repeat SequencesTranscriptional ActivationGene Expression Regulation, ViralHEK293 CellsHeterogeneous-Nuclear Ribonucleoprotein Group A-BHIV-1HumansProtein BindingHeterogeneous-Nuclear Ribonucleoprotein Group A-B

Identifiers

PMID28338097
PMCPMC5364415
OpenAlexW2598798775

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.