Evidence map›Paper›PMID 28337968›Full record

ArticleeLife2017

CRISPR/Cas9 mutagenesis invalidates a putative cancer dependency targeted in on-going clinical trials.

Ann Lin, Christopher J Giuliano, Nicole M Sayles, Jason M Sheltzer

Abstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed.

  1. Review
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  7. FTO depletion does not alter mbioRxiv : the preprint server for biology · 2025
    Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Targeting MELK in tumor cells and tumor microenvironment: from function and mechanism to therapeutic application.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  14. Review
  15. Article
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  18. Article
  19. Spatiotemporal regulation of MELK during mitosis.Frontiers in cell and developmental biology · 2024
    Article
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ann LinCold Spring Harbor Laboratory, Cold Spring Harbor, United States.ORCID 0000-0002-4618-8120
Christopher J GiulianoCold Spring Harbor Laboratory, Cold Spring Harbor, United States.ORCID 0000-0002-0586-6095
Nicole M SaylesCold Spring Harbor Laboratory, Cold Spring Harbor, United States.ORCID 0000-0001-7460-9095
Jason M SheltzerCold Spring Harbor Laboratory, Cold Spring Harbor, United States.ORCID 0000-0003-1381-1323

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
Identification and characterization of genomic features affecting survival duration in cancerDP5OD021385 · OD · COLD SPRING HARBOR LABORATORY · PI SHELTZER, JASON · 2015 to 2020
$2.8M
NCI NIH HHS P30 CA045508NIH HHS DP5 OD021385
6 · The paper itself

Abstract

The Maternal Embryonic Leucine Zipper Kinase (MELK) has been reported to be a genetic dependency in several cancer types. MELK RNAi and small-molecule inhibitors of MELK block the proliferation of various cancer cell lines, and MELK knockdown has been described as particularly effective against the highly-aggressive basal/triple-negative subtype of breast cancer. Based on these preclinical results, the MELK inhibitor OTS167 is currently being tested as a novel chemotherapy agent in several clinical trials. Here, we report that mutagenizing MELK with CRISPR/Cas9 has no effect on the fitness of basal breast cancer cell lines or cell lines from six other cancer types. Cells that harbor null mutations in MELK exhibit wild-type doubling times, cytokinesis, and anchorage-independent growth. Furthermore, MELK-knockout lines remain sensitive to OTS167, suggesting that this drug blocks cell division through an off-target mechanism. In total, our results undermine the rationale for a series of current clinical trials and provide an experimental approach for the use of CRISPR/Cas9 in preclinical target validation that can be broadly applied.

Indexed as

Gene TargetingMutagenesisCell Line, TumorCell SurvivalCRISPR-Cas SystemsGene Knockout TechniquesHumansProtein Serine-Threonine KinasesMELK protein, humanProtein Serine-Threonine Kinasescancer biologychromosomesCRISPRgenesgenetic dependencyhumanmitosisprotein kinasetriple-negative breast cancer

Identifiers

PMID28337968
PMCPMC5365317

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.