Evidence map›Paper›PMID 28336562›Full record

ArticleScience (New York, N.Y.)2017

De novo assembly of the

Olga Dudchenko, Sanjit S Batra, Arina D Omer, Sarah K Nyquist, Marie Hoeger, Neva C Durand, Muhammad S Shamim, Ido Machol, Eric S Lander, Aviva Presser Aiden and 1 more

Abstract readValidation Study
In one paragraph

Article in Science (New York, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,907 papers.

0numbers the graph read from it
0cells of the map it votes in
1,907citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,907 citing papers in PubMed.

  1. Article
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  6. Review
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  13. Telomere-to-Telomere Genome Assemblies ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  14. Rapidly evolving aphid gall effector proteins exhibit saposin-like folds.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  15. Article
  16. Article
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  18. Article
  19. Article
  20. Article

1,847 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Olga DudchenkoThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0001-9163-9544
Sanjit S BatraThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.
Arina D OmerThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.
Sarah K NyquistThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.
Marie HoegerThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0002-7175-0736
Neva C DurandThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.
Muhammad S ShamimThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0002-2600-5147
Ido MacholThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0001-9042-2765
Eric S LanderBroad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.ORCID 0000-0003-2662-4631
Aviva Presser AidenThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0002-5445-0969
Erez Lieberman AidenThe Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030, USA. erez@erez.com.ORCID 0000-0003-0634-6486

Funding

Center for Cell CircuitsP50HG006193 · NHGRI · BROAD INSTITUTE, INC. · PI REGEV, AVIV · 2011 to 2015
$15.6M
Center for Cell CircuitsRM1HG006193 · NHGRI · BROAD INSTITUTE, INC. · PI BLAINEY, PAUL CLARK, HACOHEN, NIR · 2016 to 2020
$14.9M
GENOME WIDE MAPPING OF LOOPS USING IN SITU HI-CUM1HG009375 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI LIEBERMAN-AIDEN, EREZ · 2017 to 2021
$4.7M
Exploring how the genome folds through proximity ligation and sequencingDP2OD008540 · OD · BROAD INSTITUTE, INC. · PI LIEBERMAN-AIDEN, EREZ · 2011 to 2016
$3.0M
Supplement - Beyond pairwise DNA contacts: exploring higher-order genome structure using proximity ligationU01HL130010 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI LIEBERMAN-AIDEN, EREZ · 2015 to 2019
$2.3M
NHGRI NIH HHS P50 HG006193NHGRI NIH HHS RM1 HG006193NHGRI NIH HHS UM1 HG009375NHLBI NIH HHS U01 HL130010NIH HHS DP2 OD008540
6 · The paper itself

Abstract

The Zika outbreak, spread by the

Indexed as

Genome, InsectAedesAnimalsConserved SequenceContig MappingCulexGene RearrangementHumansNucleic Acid Conformation

Identifiers

PMID28336562
PMCPMC5635820

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.