Evidence map›Paper›PMID 28335735›Full record

ArticleBMC genomics2017

Population diversity of the genetically determined TTR expression in human tissues and its implications in TTR amyloidosis.

Andrea Iorio, Flavio De Angelis, Marco Di Girolamo, Marco Luigetti, Luca G Pradotto, Anna Mazzeo, Sabrina Frusconi, Filomena My, Dario Manfellotto, Maria Fuciarelli and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  9. Ancestry-specific and sex-specific risk alleles identified in a genome-wide gene-by-alcohol dependence interaction study of risky sexual behaviors.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2017
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 8 institutions in 2 countries.

Andrea IorioDepartment of Biology, University of Rome Tor Vergata, Rome, Italy.
Flavio De AngelisDepartment of Biology, University of Rome Tor Vergata, Rome, Italy.
Marco Di GirolamoClinical Pathophysiology Center, AFaR Foundation - "San Giovanni Calibita" Fatebenefratelli Hospital, Isola Tiberina, Rome, Italy.
Marco LuigettiDepartments of Geriatrics, Neurosciences & Orthopedics, Institute of Neurology, Catholic University of the Sacred Heart, Fondazione Policlinico Universitario A. Gemelli, Rome, Italy.
Luca G PradottoDivision of Neurology and Neurorehabilitation, San Giuseppe Hospital, IRCCS-Istituto Auxologico Italiano, Piancavallo (VB), Italy.
Anna MazzeoDepartment of Clinical and Experimental Medicine, University of Messina, Messina, Italy.
Sabrina FrusconiGenetic Diagnostics Unit, Laboratory Department, Careggi University Hospital, Florence, Italy.
Filomena MyDivision of Neurology, "Vito Fazzi" Hospital, Lecce, Italy.
Dario ManfellottoClinical Pathophysiology Center, AFaR Foundation - "San Giovanni Calibita" Fatebenefratelli Hospital, Isola Tiberina, Rome, Italy.
Maria FuciarelliDepartment of Biology, University of Rome Tor Vergata, Rome, Italy.
Renato PolimantiDepartment of Psychiatry, Yale University School of Medicine and VA CT Healthcare Center, VA CT 116A2, 950 Campbell Avenue, West Haven, CT, 06516, USA. renato.polimanti@yale.edu.
University of Rome Tor Vergata · ITFatebenefratelli Hospital · ITAzienda Ospedaliero-Universitaria Careggi · ITIRCCS Istituto Auxologico Italiano · ITOspedale Vito Fazzi · ITUniversità Cattolica del Sacro Cuore · ITUniversity of Messina · ITVA Connecticut Healthcare System · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTransthyretin (TTR) amyloidosis is a hereditary disease with a complex genotype-phenotype correlation. We conducted a literature survey to define the clinical landscape of TTR amyloidosis across populations worldwide. Then, we investigated whether the genetically determined TTR expression differs among human populations, contributing to the differences observed in patients. Polygenic scores for genetically determined TTR expression in 14 clinically relevant tissues were constructed using data from the GTEx (Genotype-Tissue Expression) project and tested in the samples from the 1,000 Genomes Project.

resultsWe observed differences among the ancestral groups and, to a lesser extent, among the investigated populations within the ancestry groups. Scandinavian populations differed in their genetically determined TTR expression of skeletal muscle tissue with respect to Southern Europeans (p = 6.79*10

conclusionsGenetically determined TTR expression varied across human populations. This might contribute to the genotype-phenotype correlation of TTR amyloidosis.

Indexed as

Gene Expression RegulationAmyloidosisGenotypeHumansPhenotypePrealbuminPrealbuminAmyloidGene expressionGenotype-phenotype correlationMutationTransthyretin

Identifiers

PMID28335735
PMCPMC5364715
OpenAlexW2603466146

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.