Evidence map›Paper›PMID 28335417›Full record

ReviewSensors (Basel, Switzerland)2017

DNA Sequencing Sensors: An Overview.

Jose Antonio Garrido-Cardenas, Federico Garcia-Maroto, Jose Antonio Alvarez-Bermejo, Francisco Manzano-Agugliaro

Abstract readReview
In one paragraph

Review in Sensors (Basel, Switzerland), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
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  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. DNA Sequencing Methods: From Past to Present.The Eurasian journal of medicine · 2022
    Article
  13. Article
  14. Review
  15. The medical cyborg concept.EMBnet.journal · 2022
    Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jose Antonio Garrido-CardenasDepartment of Biology and Geology, University of Almeria, 04120 Almeria, Spain. jcardena@ual.es.
Federico Garcia-MarotoDepartment of Chemistry and Physics, University of Almeria, 04120 Almeria, Spain. fgmaroto@ual.es.
Jose Antonio Alvarez-BermejoDepartment of Informatics, University of Almeria, 04120 Almeria, Spain. jaberme@ual.es.
Francisco Manzano-AgugliaroDepartment of Engineering, University of Almeria, 04120 Almeria, Spain. fmanzano@ual.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The first sequencing of a complete genome was published forty years ago by the double Nobel Prize in Chemistry winner Frederick Sanger. That corresponded to the small sized genome of a bacteriophage, but since then there have been many complex organisms whose DNA have been sequenced. This was possible thanks to continuous advances in the fields of biochemistry and molecular genetics, but also in other areas such as nanotechnology and computing. Nowadays, sequencing sensors based on genetic material have little to do with those used by Sanger. The emergence of mass sequencing sensors, or new generation sequencing (NGS) meant a quantitative leap both in the volume of genetic material that was able to be sequenced in each trial, as well as in the time per run and its cost. One can envisage that incoming technologies, already known as fourth generation sequencing, will continue to cheapen the trials by increasing DNA reading lengths in each run. All of this would be impossible without sensors and detection systems becoming smaller and more precise. This article provides a comprehensive overview on sensors for DNA sequencing developed within the last 40 years.

Indexed as

Sequence Analysis, DNABase SequenceDNA sequencingfluorescencenanoporenext generation sequencing (NGS)pyrosequencingsemiconductor

Identifiers

PMID28335417
PMCPMC5375874

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.