Evidence map›Paper›PMID 28335401›Full record

ArticleMolecules (Basel, Switzerland)2017

The Vital Dye CDr10b Labels the Zebrafish Mid-Intestine and Lumen.

Veronika Sander, Shantanu Patke, Jung Y Lee, Young-Tae Chang, Alan J Davidson

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Veronika SanderDepartment of Molecular Medicine & Pathology, University of Auckland, Auckland 1142, New Zealand. v.sander@auckland.ac.nz.
Shantanu PatkeDepartment of Molecular Medicine & Pathology, University of Auckland, Auckland 1142, New Zealand. spat261@aucklanduni.ac.nz.
Jung Y LeeDepartment of Chemistry & NUS MedChem Program of Life Sciences Institute, National University of Singapore and Singapore Bioimaging Consortium, A* STAR, Singapore 138667, Singapore. lsilj@nus.edu.sg.
Young-Tae ChangDepartment of Chemistry & NUS MedChem Program of Life Sciences Institute, National University of Singapore and Singapore Bioimaging Consortium, A* STAR, Singapore 138667, Singapore. chmcyt@nus.edu.sg.
Alan J DavidsonDepartment of Molecular Medicine & Pathology, University of Auckland, Auckland 1142, New Zealand. a.davidson@auckland.ac.nz.
University of Auckland · NZAgency for Science, Technology and Research · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe the use of the fluorescent reporter compound CDr10b to label mid-intestinal structures in zebrafish larvae after simple immersion. CDr10b is deposited into the gut where it initially fills the lumen and is excreted. Using laser-mediated injury of the intestine, we show that CDr10b provides a useful readout of the integrity and repair of the epithelial cell barrier. In addition, CDr10b specifically labels the absorptive mid-intestine segment that is analogous to the mammalian small intestine. By perturbing retinoic acid signaling, which regulates the size of the mid-intestine segment, we show that CDr10b is a valuable tool to rapidly assess developmental malformations of the intestine in live animals.

Indexed as

AnimalsBoron CompoundsIntestinesLarvaMicroscopy, FluorescenceSignal TransductionTretinoinZebrafishBoron CompoundsCDr10b compoundTretinoinCDr10bgut developmentlaser ablationmid-intestinevital dyezebrafish

Identifiers

PMID28335401
PMCPMC6155399
OpenAlexW2595292271

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.