Evidence map›Paper›PMID 28334850›Full record

ArticleNucleic acids research2017

Aicardi-Goutières syndrome protein TREX1 suppresses L1 and maintains genome integrity through exonuclease-independent ORF1p depletion.

Peng Li, Juan Du, John L Goodier, Jingwei Hou, Jian Kang, Haig H Kazazian, Ke Zhao, Xiao-Fang Yu

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 84 citations in OpenAlex.

  1. Pooled it
  2. LINE-1 Retrotransposons and Amyotrophic Lateral Sclerosis.International journal of molecular sciences · 2026
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  11. STING antagonists, synthesizedRSC medicinal chemistry · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Peng LiInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin 130061, China.
Juan DuInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin 130061, China.
John L GoodierInstitute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Jingwei HouInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin 130061, China.
Jian KangInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin 130061, China.
Haig H KazazianInstitute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Ke ZhaoInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin 130061, China.
Xiao-Fang YuInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin 130061, China.
Jilin University · CNFirst Hospital of Jilin University · CNJohns Hopkins Medicine · USJohns Hopkins University · US

Funding

A role for endogenous retroelements in Aicardi-Goutieres SyndromeR21HD083915 · NICHD · JOHNS HOPKINS UNIVERSITY · PI GOODIER, JOHN LAWRENCE · 2016 to 2017
$449k
NICHD NIH HHS R21 HD083915
6 · The paper itself

Abstract

Maintaining genome integrity is important for cells and damaged DNA triggers autoimmunity. Previous studies have reported that Three-prime repair exonuclease 1(TREX1), an endogenous DNA exonuclease, prevents immune activation by depleting damaged DNA, thus preventing the development of certain autoimmune diseases. Consistently, mutations in TREX1 are linked with autoimmune diseases such as systemic lupus erythematosus, Aicardi-Goutières syndrome (AGS) and familial chilblain lupus. However, TREX1 mutants competent for DNA exonuclease activity are also linked to AGS. Here, we report a nuclease-independent involvement of TREX1 in preventing the L1 retrotransposon-induced DNA damage response. TREX1 interacted with ORF1p and altered its intracellular localization. Furthermore, TREX1 triggered ORF1p depletion and reduced the L1-mediated nicking of genomic DNA. TREX1 mutants related to AGS were deficient in inducing ORF1p depletion and could not prevent L1-mediated DNA damage. Therefore, our findings not only reveal a new mechanism for TREX1-mediated L1 suppression and uncover a new function for TREX1 in protein destabilization, but they also suggest a novel mechanism for TREX1-mediated suppression of innate immune activation through maintaining genome integrity.

Indexed as

Genome, HumanRetroelementsAutoimmune Diseases of the Nervous SystemAutoimmunityDNADNA Breaks, Double-StrandedExodeoxyribonucleasesGene Expression RegulationGenomic InstabilityHEK293 CellsHeLa CellsHumansMutationNervous System MalformationsPhosphoproteinsPhosphorylationDNAExodeoxyribonucleasesORF1 protein, humanPhosphoproteinsProteinsRecombinant ProteinsRetroelementsRNA, Small Interferingthree prime repair exonuclease 1

Identifiers

PMID28334850
PMCPMC5416883
OpenAlexW2611434505

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.