Evidence map›Paper›PMID 28332923›Full record

ArticleTranscription2017

Different types of pausing modes during transcription initiation.

Eitan Lerner, Antonino Ingargiola, Jookyung J Lee, Sergei Borukhov, Xavier Michalet, Shimon Weiss

Abstract read
In one paragraph

Article in Transcription, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Eitan Lernera Department of Chemistry & Biochemistry , University of California , Los Angeles , CA , USA.ORCID 0000-0002-3791-5277
Antonino Ingargiolaa Department of Chemistry & Biochemistry , University of California , Los Angeles , CA , USA.ORCID 0000-0002-9348-1397
Jookyung J Leeb Rowan University School of Osteopathic Medicine , Stratford , NJ , USA.ORCID 0000-0002-6551-2870
Sergei Borukhovb Rowan University School of Osteopathic Medicine , Stratford , NJ , USA.ORCID 0000-0002-3517-3003
Xavier Michaleta Department of Chemistry & Biochemistry , University of California , Los Angeles , CA , USA.ORCID 0000-0001-6602-7693
Shimon Weissa Department of Chemistry & Biochemistry , University of California , Los Angeles , CA , USA.ORCID 0000-0002-0720-5426

Funding

Single Molecule Studies of Prokaryotic and Eukaryotic Transcription MachineriesR01GM069709 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WEISS, SHIMON · 2005 to 2012
$2.9M
Single-photon counting APD arrays for high-through-put single-molecule assaysR01GM095904 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GHIONI, MASSIMO ANTONIO, MICHALET, XAVIER · 2012 to 2016
$2.0M
NIGMS NIH HHS R01 GM069709NIGMS NIH HHS R01 GM095904
6 · The paper itself

Abstract

In many cases, initiation is rate limiting to transcription. This due in part to the multiple cycles of abortive transcription that delay promoter escape and the transition from initiation to elongation. Pausing of transcription in initiation can further delay promoter escape. The previously hypothesized pausing in initiation was confirmed by two recent studies from Duchi et al.

Indexed as

Transcription Initiation, GeneticDNA-Directed RNA PolymerasesFluorescence Resonance Energy TransferModels, GeneticRNA, MessengerSingle Molecule ImagingDNA-Directed RNA PolymerasesRNA, Messengerabortive initiationbacktrackingpromoter escapesingle-molecule FRETtranscription initiationtranscription pausing

Identifiers

PMID28332923
PMCPMC5574527

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.