Evidence map›Paper›PMID 28331418›Full record

ArticleYonago acta medica2017

Optimization of PCR Condition: The First Study of High Resolution Melting Technique for Screening of

Hesty Wahyuningsih, Ferdy K Cayami, Udin Bahrudin, Mochamad A Sobirin, Farmaditya Ep Mundhofir, Sultana Mh Faradz, Ichiro Hisatome

Abstract read
In one paragraph

Article in Yonago acta medica, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hesty WahyuningsihCenter for Biomedical Research, Diponegoro University Faculty of Medicine, Semarang, Indonesia.
Ferdy K CayamiCenter for Biomedical Research, Diponegoro University Faculty of Medicine, Semarang, Indonesia.
Udin BahrudinCenter for Biomedical Research, Diponegoro University Faculty of Medicine, Semarang, Indonesia; †Department of Cardiology and Vascular Medicine, Diponegoro University Faculty of Medicine, Semarang, Indonesia.
Mochamad A Sobirin†Department of Cardiology and Vascular Medicine, Diponegoro University Faculty of Medicine, Semarang, Indonesia; ‡Department of Pharmacology and Therapeutic, Diponegoro University Faculty of Medicine, Semarang, Indonesia.
Farmaditya Ep MundhofirCenter for Biomedical Research, Diponegoro University Faculty of Medicine, Semarang, Indonesia.
Sultana Mh FaradzCenter for Biomedical Research, Diponegoro University Faculty of Medicine, Semarang, Indonesia.
Ichiro Hisatome§Division of Regenerative Medicine and Therapeutics, Department of Genetic Medicine and Regenerative Therapeutics, Institute of Regenerative Medicine and Biofunction, Tottori University, Yonago 683-8503, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHigh resolution melting (HRM) is a post-PCR technique for variant screening and genotyping based on the different melting points of DNA fragments. The advantages of this technique are that it is fast, simple, and efficient and has a high output, particularly for screening of a large number of samples.

methodsGenomic DNA was isolated from a peripheral blood sample using the salting out method.

resultsFive sets of primers covering the translated region of

conclusionIn addition to the suitable procedures of DNA isolation and quantification, primer design and an estimated PCR product size, the data of this study showed that appropriate annealing temperature and PCR cycles were important factors in optimization of HRM technique for variant screening in

Indexed as

APOA1HRMoptimization

Identifiers

PMID28331418
PMCPMC5355841

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.