Evidence map›Paper›PMID 28330855›Full record

ArticleEMBO reports2017

Conserved Atg8 recognition sites mediate Atg4 association with autophagosomal membranes and Atg8 deconjugation.

Susana Abreu, Franziska Kriegenburg, Rubén Gómez-Sánchez, Muriel Mari, Jana Sánchez-Wandelmer, Mads Skytte Rasmussen, Rodrigo Soares Guimarães, Bettina Zens, Martina Schuschnig, Ralph Hardenberg and 5 more

Abstract read
In one paragraph

Article in EMBO reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. NADCells · 2025
    Review
  5. Article
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  8. Canonical and noncanonical autophagy: involvement in Parkinson's disease.Frontiers in cell and developmental biology · 2025
    Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Recognition of Mycobacterium tuberculosis by macrophage Toll-like receptor and its role in autophagy.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2024
    Review
  15. Review
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Susana AbreuDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.ORCID 0000-0002-3146-5762
Franziska KriegenburgDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Rubén Gómez-SánchezDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.ORCID 0000-0002-8274-3259
Muriel MariDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Jana Sánchez-WandelmerDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Mads Skytte RasmussenMolecular Cancer Research Group, Institute of Medical Biology, University of Tromsø - The Arctic University of Norway, Tromsø, Norway.
Rodrigo Soares GuimarãesDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Bettina ZensDepartment of Biochemistry and Cell Biology, Max F. Perutz Laboratories (MFPL), Vienna Biocenter (VBC), University of Vienna, Vienna, Austria.
Martina SchuschnigDepartment of Biochemistry and Cell Biology, Max F. Perutz Laboratories (MFPL), Vienna Biocenter (VBC), University of Vienna, Vienna, Austria.
Ralph HardenbergDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Matthias PeterDepartment of Biology, Institute of Biochemistry, Swiss Federal Institute of Technology, Zurich, Switzerland.
Terje JohansenMolecular Cancer Research Group, Institute of Medical Biology, University of Tromsø - The Arctic University of Norway, Tromsø, Norway.ORCID 0000-0003-1451-9578
Claudine KraftDepartment of Biochemistry and Cell Biology, Max F. Perutz Laboratories (MFPL), Vienna Biocenter (VBC), University of Vienna, Vienna, Austria.ORCID 0000-0002-3324-4701
Sascha MartensDepartment of Biochemistry and Cell Biology, Max F. Perutz Laboratories (MFPL), Vienna Biocenter (VBC), University of Vienna, Vienna, Austria.ORCID 0000-0003-3786-8199
Fulvio ReggioriDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands f.m.reggiori@umcg.nl.ORCID 0000-0003-2652-2686

Funding

Austrian Science Fund FWF P 25522Austrian Science Fund FWF P 28113
6 · The paper itself

Abstract

Deconjugation of the Atg8/LC3 protein family members from phosphatidylethanolamine (PE) by Atg4 proteases is essential for autophagy progression, but how this event is regulated remains to be understood. Here, we show that yeast Atg4 is recruited onto autophagosomal membranes by direct binding to Atg8 via two evolutionarily conserved Atg8 recognition sites, a classical LC3-interacting region (LIR) at the C-terminus of the protein and a novel motif at the N-terminus. Although both sites are important for Atg4-Atg8 interaction

Indexed as

AutophagyAutophagosomesAutophagy-Related Protein 8 FamilyAutophagy-Related ProteinsMembranesMicrotubule-Associated ProteinsPhagosomesPhosphatidylethanolaminesProtein BindingRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsAtg4 protein, S cerevisiaeATG8 protein, S cerevisiaeAutophagy-Related Protein 8 FamilyAutophagy-Related ProteinsMicrotubule-Associated ProteinsphosphatidylethanolaminePhosphatidylethanolaminesRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsautophagosomeautophagydeconjugationLC3phagophore assembly site

Identifiers

PMID28330855
PMCPMC5412903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.