Evidence map›Paper›PMID 28329008›Full record

ArticlePloS one2017

Insulin and diet-induced changes in the ubiquitin-modified proteome of rat liver.

Shilpa R Nagarajan, Amanda E Brandon, Jessie A McKenna, Harrison C Shtein, Thinh Q Nguyen, Eurwin Suryana, Philip Poronnik, Gregory J Cooney, Darren N Saunders, Andrew J Hoy

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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  5. SOD1Journal of cell science · 2018
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Shilpa R NagarajanDiscipline of Physiology, School of Medical Sciences & Bosch Institute, Charles Perkins Centre, University of Sydney, Sydney, NSW, Australia.
Amanda E BrandonDiabetes and Metabolism Division, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
Jessie A McKennaKinghorn Cancer Centre, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
Harrison C ShteinDiscipline of Physiology, School of Medical Sciences & Bosch Institute, Charles Perkins Centre, University of Sydney, Sydney, NSW, Australia.
Thinh Q NguyenDiscipline of Physiology, School of Medical Sciences & Bosch Institute, Charles Perkins Centre, University of Sydney, Sydney, NSW, Australia.
Eurwin SuryanaDiabetes and Metabolism Division, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
Philip PoronnikDiscipline of Physiology, School of Medical Sciences & Bosch Institute, Charles Perkins Centre, University of Sydney, Sydney, NSW, Australia.
Gregory J CooneyDiabetes and Metabolism Division, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
Darren N SaundersKinghorn Cancer Centre, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
Andrew J HoyDiscipline of Physiology, School of Medical Sciences & Bosch Institute, Charles Perkins Centre, University of Sydney, Sydney, NSW, Australia.ORCID http://orcid.org/0000-0003-3922-1137
Garvan Institute of Medical Research · AUThe University of Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ubiquitin is a crucial post-translational modification regulating numerous cellular processes, but its role in metabolic disease is not well characterized. In this study, we identified the in vivo ubiquitin-modified proteome in rat liver and determined changes in this ubiquitome under acute insulin stimulation and high-fat and sucrose diet-induced insulin resistance. We identified 1267 ubiquitinated proteins in rat liver across diet and insulin-stimulated conditions, with 882 proteins common to all conditions. KEGG pathway analysis of these proteins identified enrichment of metabolic pathways, TCA cycle, glycolysis/gluconeogenesis, fatty acid metabolism, and carbon metabolism, with similar pathways altered by diet and insulin resistance. Thus, the rat liver ubiquitome is sensitive to diet and insulin stimulation and this is perturbed in insulin resistance.

Indexed as

AnimalsCarbonCitric Acid CycleDietDietary FatsFatty AcidsGluconeogenesisGlycolysisInsulinInsulin ResistanceLipid MetabolismLiverMaleMetabolic Networks and PathwaysProtein Processing, Post-TranslationalProteomeCarbonDietary FatsFatty AcidsInsulinProteomeSucroseUbiquitin

Identifiers

PMID28329008
PMCPMC5362237
OpenAlexW2603361760

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.