Evidence map›Paper›PMID 28327910›Full record

ArticleGigaScience2017

Phenobook: an open source software for phenotypic data collection.

Juan M Crescente, Fabio Guidobaldi, Melina Demichelis, Maria B Formica, Marcelo Helguera, Leonardo S Vanzetti

Abstract read
In one paragraph

Article in GigaScience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Enhancing the rate of genetic gain in public-sector plant breeding programs: lessons from the breeder's equation.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Juan M CrescenteGrupo Biotecnologia y Recursos Genéticos, EEA INTA Marcos Juárez, Ruta 12 km 3, 2580 Marcos Juárez, Argentina.
Fabio GuidobaldiGrupo Biotecnologia y Recursos Genéticos, EEA INTA Marcos Juárez, Ruta 12 km 3, 2580 Marcos Juárez, Argentina.
Melina DemichelisGrupo Biotecnologia y Recursos Genéticos, EEA INTA Marcos Juárez, Ruta 12 km 3, 2580 Marcos Juárez, Argentina.
Maria B FormicaGrupo Biotecnologia y Recursos Genéticos, EEA INTA Marcos Juárez, Ruta 12 km 3, 2580 Marcos Juárez, Argentina.
Marcelo HelgueraGrupo Biotecnologia y Recursos Genéticos, EEA INTA Marcos Juárez, Ruta 12 km 3, 2580 Marcos Juárez, Argentina.
Leonardo S VanzettiGrupo Biotecnologia y Recursos Genéticos, EEA INTA Marcos Juárez, Ruta 12 km 3, 2580 Marcos Juárez, Argentina.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Research projects often involve observation, registration, and data processing starting from information obtained in field experiments. In many cases, these tasks are carried out by several persons in different places, times, and ways, adding different levels of complexity and error in data collecting. Furthermore, data processing can be time consuming, and input errors may produce unwanted results. Results: We have developed a novel, open source software called Phenobook, an easy, flexible, and intuitive tool to organize, collect, and save experimental data for further analyses. Phenobook was conceived to collect phenotypic observations in a user-friendly, cost-effective way. It consists of a web-based software for experiment design, data input and visualization, and exportation, combined with a mobile application for remote data collecting. We provide in this article a detailed description of the developed tool. Conclusion: Phenobook is a software tool that can be easily implemented in collaborative research and development projects involving data collecting and forward analyses. Adopting Phenobook is expected to improve the involved processes by minimizing input errors, resulting in higher quality and reliability of the research outcomes.

Indexed as

PhenotypeSoftwareDatabases, GeneticGenetic Association StudiesUser-Computer InterfaceWeb Browserbig datadatabasedata collection

Identifiers

PMID28327910
PMCPMC5530315

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.