Evidence map›Paper›PMID 28325922›Full record

ArticleEmerging microbes & infections2017

Variability in H9N2 haemagglutinin receptor-binding preference and the pH of fusion.

Thomas P Peacock, Donald J Benton, Jean-Remy Sadeyen, Pengxiang Chang, Joshua E Sealy, Juliet E Bryant, Stephen R Martin, Holly Shelton, John W McCauley, Wendy S Barclay and 1 more

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Thomas P PeacockAvian Viral Diseases Programme, The Pirbright Institute, Pirbright Woking, GU24 0NF, UK.
Donald J BentonThe Francis Crick Institute, London NW1 1AT, UK.
Jean-Remy SadeyenAvian Viral Diseases Programme, The Pirbright Institute, Pirbright Woking, GU24 0NF, UK.
Pengxiang ChangAvian Viral Diseases Programme, The Pirbright Institute, Pirbright Woking, GU24 0NF, UK.
Joshua E SealyAvian Viral Diseases Programme, The Pirbright Institute, Pirbright Woking, GU24 0NF, UK.
Juliet E BryantOxford University Clinical Research Unit and Wellcome Trust Major Overseas Programme, National Hospital of Tropical Diseases, 78 Giai Phong, Dong Da, Hanoi, Vietnam.
Stephen R MartinThe Francis Crick Institute, London NW1 1AT, UK.
Holly SheltonAvian Viral Diseases Programme, The Pirbright Institute, Pirbright Woking, GU24 0NF, UK.
John W McCauleyThe Francis Crick Institute, London NW1 1AT, UK.
Wendy S BarclayImperial College London, London W2 1NY, UK.
Munir IqbalAvian Viral Diseases Programme, The Pirbright Institute, Pirbright Woking, GU24 0NF, UK.
The Pirbright Institute · GBThe Francis Crick Institute · GBImperial College London · GBOxford University Clinical Research Unit · VN

Funding

Biotechnology and Biological Sciences Research Council BB/E010806/1Biotechnology and Biological Sciences Research Council BBS/E/I/00007031Biotechnology and Biological Sciences Research Council BBS/E/I/00007038Biotechnology and Biological Sciences Research Council BBS/E/I/00007039Medical Research Council MC_U117512723Wellcome Trust FC001030
6 · The paper itself

Abstract

H9N2 avian influenza viruses are primarily a disease of poultry; however, they occasionally infect humans and are considered a potential pandemic threat. Little work has been performed to assess the intrinsic biochemical properties related to zoonotic potential of H9N2 viruses. The objective of this study, therefore, was to investigate H9N2 haemagglutinins (HAs) using two well-known correlates for human adaption: receptor-binding avidity and pH of fusion. Receptor binding was characterized using bio-layer interferometry to measure virus binding to human and avian-like receptor analogues and the pH of fusion was assayed by syncytium formation in virus-infected cells at different pHs. We characterized contemporary H9N2 viruses of the zoonotic G1 lineage, as well as representative viruses of the zoonotic BJ94 lineage. We found that most contemporary H9N2 viruses show a preference for sulphated avian-like receptor analogues. However, the 'Eastern' G1 H9N2 viruses displayed a consistent preference in binding to a human-like receptor analogue. We demonstrate that the presence of leucine at position 226 of the HA receptor-binding site correlated poorly with the ability to bind a human-like sialic acid receptor. H9N2 HAs also display variability in their pH of fusion, ranging between pH 5.4 and 5.85 which is similar to that of the first wave of human H1N1pdm09 viruses but lower than the pH of fusion seen in zoonotic H5N1 and H7N9 viruses. Our results suggest possible molecular mechanisms that may underlie the relatively high prevalence of human zoonotic infection by particular H9N2 virus lineages.

Indexed as

Membrane FusionAnimalsBinding SitesCell MembraneChlorocebus aethiopsDogsHEK293 CellsHemagglutininsHumansHydrogen-Ion ConcentrationInfluenza A Virus, H9N2 SubtypeInfluenza, HumanInterferometryMadin Darby Canine Kidney CellsOrthomyxoviridae InfectionsPoultryHemagglutininsReceptors, VirusSulfatesViral Proteins

Identifiers

PMID28325922
PMCPMC5378918
OpenAlexW2601976335

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.