Evidence map›Paper›PMID 28325899›Full record

ArticleScientific reports2017

Complete Genomic and Ultrastructural Analysis of a Nam Dinh Virus Isolated from Culex pipiens quinquefasciatus in China.

Jianming Zhou, Yujuan Jin, Yingjian Chen, Jingmei Li, Qiwen Zhang, Xianqing Xie, Liping Gan, Qu Liu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Establishment ofmSphere · 2021
    Article
  4. Article
  5. Article
  6. Mosquito-Associated Viruses in China.Virologica Sinica · 2018
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jianming ZhouLonggang Center for Disease Control and Prevention in Shenzhen, Shenzhen, China.
Yujuan JinLonggang Center for Disease Control and Prevention in Shenzhen, Shenzhen, China.
Yingjian ChenLonggang Center for Disease Control and Prevention in Shenzhen, Shenzhen, China.
Jingmei LiLonggang Center for Disease Control and Prevention in Shenzhen, Shenzhen, China.
Qiwen ZhangLonggang Center for Disease Control and Prevention in Shenzhen, Shenzhen, China.
Xianqing XieLonggang Center for Disease Control and Prevention in Shenzhen, Shenzhen, China.
Liping GanLonggang Center for Disease Control and Prevention in Shenzhen, Shenzhen, China.
Qu LiuLonggang Center for Disease Control and Prevention in Shenzhen, Shenzhen, China. szliuqu@163.com.
Shenzhen Center for Disease Control and Prevention · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Nam Dinh virus (NDiV) was isolated from Culex quinquefasciatus in Shenzhen, China, for the first time, in 2011. In this study, we characterized the ultrastructure of NDiV, determined its complete genome sequence and made comparisons with other known nidoviruses. Electron microscopic observation revealed that the NDiV strain isolated in China produced viral nucleocapsid-like particles and vesicles in host cells. The extracellular virions were enveloped and were spherical with short spikes. The complete genome sequence of the newly isolated NDiV was submitted to the GenBank database (GenBank accession number KF522691). Sequencing of the viral genome showed that the homologies of NDiV isolated in China and Vietnam were greater than 94.0% and 89.0% at the nucleotide and amino acid sequence levels, respectively. Moreover, gene substitution was detected, whereas insertions and deletions were not. A phylogenetic tree analysis showed that these viruses belong to the genus Alphamesonivirus1 of the family Mesoniviridae. The similarity between the two viruses regarding morphological and molecular biological characteristics indicates that the molecular genetics of NDiV are conservative and that the regional differences are unlikely to have a significant effect. This is the first report of the isolation and complete sequencing of a mesonivirus in mainland China.

Indexed as

Genome, ViralAnimalsChinaCluster AnalysisCulexMicroscopy, ElectronNidoviralesPhylogenySequence Analysis, DNASequence HomologyVirionWhole Genome Sequencing

Identifiers

PMID28325899
PMCPMC5428213
OpenAlexW2641350266

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.