Evidence map›Paper›PMID 28325812›Full record

ArticleG3 (Bethesda, Md.)2017

TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network.

Matej Usaj, Yizhao Tan, Wen Wang, Benjamin VanderSluis, Albert Zou, Chad L Myers, Michael Costanzo, Brenda Andrews, Charles Boone

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 1 synthesis or guideline pooled it.

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31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Matej UsajThe Donnelly Centre, University of Toronto, Ontario M5S 3E1, Canada.
Yizhao TanThe Donnelly Centre, University of Toronto, Ontario M5S 3E1, Canada.
Wen WangDepartment of Computer Science and Engineering, University of Minnesota-Twin Cities, Minneapolis, Minnesota 55455.
Benjamin VanderSluisDepartment of Computer Science and Engineering, University of Minnesota-Twin Cities, Minneapolis, Minnesota 55455.
Albert ZouThe Donnelly Centre, University of Toronto, Ontario M5S 3E1, Canada.
Chad L MyersDepartment of Computer Science and Engineering, University of Minnesota-Twin Cities, Minneapolis, Minnesota 55455 cmyers@cs.umn.edu michael.costanzo@utoronto.ca brenda.andrews@utoronto.ca charlie.boone@utoronto.ca.
Michael CostanzoThe Donnelly Centre, University of Toronto, Ontario M5S 3E1, Canada cmyers@cs.umn.edu michael.costanzo@utoronto.ca brenda.andrews@utoronto.ca charlie.boone@utoronto.ca.
Brenda AndrewsThe Donnelly Centre, University of Toronto, Ontario M5S 3E1, Canada cmyers@cs.umn.edu michael.costanzo@utoronto.ca brenda.andrews@utoronto.ca charlie.boone@utoronto.ca.
Charles BooneThe Donnelly Centre, University of Toronto, Ontario M5S 3E1, Canada cmyers@cs.umn.edu michael.costanzo@utoronto.ca brenda.andrews@utoronto.ca charlie.boone@utoronto.ca.

Funding

Mapping the reference genetic network of a eukaryotic cellR01HG005853 · NHGRI · UNIVERSITY OF TORONTO · PI ANDREWS, BRENDA JEAN, BOONE, CHARLES · 2010 to 2025
$7.6M
Methods for large-scale analysis of chemical-genetic interactionsR01HG005084 · NHGRI · UNIVERSITY OF MINNESOTA · PI MYERS, CHAD L · 2010 to 2022
$2.9M
CIHR FDN-143264CIHR FDN-143265NHGRI NIH HHS R01 HG005084NHGRI NIH HHS R01 HG005853
6 · The paper itself

Abstract

Providing access to quantitative genomic data is key to ensure large-scale data validation and promote new discoveries. TheCellMap.org serves as a central repository for storing and analyzing quantitative genetic interaction data produced by genome-scale Synthetic Genetic Array (SGA) experiments with the budding yeast

Indexed as

Protein Interaction MapsSoftwareProtein BindingProteomeSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsProteomeSaccharomyces cerevisiae Proteinsgenetic interactionsgenetic networksynthetic genetic array SGAyeast genetics

Identifiers

PMID28325812
PMCPMC5427489

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.