Evidence map›Paper›PMID 28323872›Full record

ArticlePloS one2017

Expression, maturation and turnover of DrrS, an unusually stable, DosR regulated small RNA in Mycobacterium tuberculosis.

Alexandra Moores, Ana B Riesco, Stefan Schwenk, Kristine B Arnvig

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 46 citations in OpenAlex.

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  8. Small RNA MTS1338 Configures a Stress Resistance Signature inInternational journal of molecular sciences · 2023
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  12. Review
  13. Microorganisms · 2021
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  14. Review
  15. Article
  16. Article
  17. On a stake-out:Non-coding RNA research · 2019
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Alexandra MooresInstitute for Structural and Molecular Biology, University College London, London, United Kingdom.
Ana B RiescoInstitute for Structural and Molecular Biology, University College London, London, United Kingdom.
Stefan SchwenkInstitute for Structural and Molecular Biology, University College London, London, United Kingdom.
Kristine B ArnvigInstitute for Structural and Molecular Biology, University College London, London, United Kingdom.ORCID http://orcid.org/0000-0002-6850-2547
Institute of Structural and Molecular Biology · GB

Funding

Medical Research Council MR/L018519/1
6 · The paper itself

Abstract

Mycobacterium tuberculosis depends on the ability to adjust to stresses encountered in a range of host environments, adjustments that require significant changes in gene expression. Small RNAs (sRNAs) play an important role as post-transcriptional regulators of prokaryotic gene expression, where they are associated with stress responses and, in the case of pathogens, adaptation to the host environment. In spite of this, the understanding of M. tuberculosis RNA biology remains limited. Here we have used a DosR-associated sRNA as an example to investigate multiple aspects of mycobacterial RNA biology that are likely to apply to other M. tuberculosis sRNAs and mRNAs. We have found that accumulation of this particular sRNA is slow but robust as cells enter stationary phase. Using reporter gene assays, we find that the sRNA core promoter is activated by DosR, and we have renamed the sRNA DrrS for DosR Regulated sRNA. Moreover, we show that DrrS is transcribed as a longer precursor, DrrS+, which is rapidly processed to the mature and highly stable DrrS. We characterise, for the first time in mycobacteria, an RNA structural determinant involved in this extraordinary stability and we show how the addition of a few nucleotides can lead to acute destabilisation. Finally, we show how this RNA element can enhance expression of a heterologous gene. Thus, the element, as well as its destabilising derivatives may be employed to post-transcriptionally regulate gene expression in mycobacteria in combination with different promoter variants. Moreover, our findings will facilitate further investigations into the severely understudied topic of mycobacterial RNA biology and into the role that regulatory RNA plays in M. tuberculosis pathogenesis.

Indexed as

Bacterial ProteinsDNA-Binding ProteinsGene Expression Regulation, BacterialHost-Pathogen InteractionsMycobacterium tuberculosisNitric OxidePhosphorylationPromoter Regions, GeneticProtein KinasesRNA, BacterialRNA, MessengerRNA, Small UntranslatedBacterial ProteinsDNA-Binding ProteinsDosR protein, Mycobacterium tuberculosisNitric OxideProtein KinasesRNA, BacterialRNA, MessengerRNA, Small Untranslated

Identifiers

PMID28323872
PMCPMC5360333
OpenAlexW2599728656

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.