Evidence map›Paper›PMID 28322571›Full record

ArticleEpigenomics2017

Age-associated DNA methylation changes in naive CD4

Mikhail G Dozmorov, Patrick Coit, Kathleen Maksimowicz-McKinnon, Amr H Sawalha

Open access · greenAbstract read
In one paragraph

Article in Epigenomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
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  17. Age as a risk factor in vasculitis.Seminars in immunopathology · 2022
    Review
  18. Article
  19. Caloric restriction induced epigenetic effects on aging.Frontiers in cell and developmental biology · 2022
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Mikhail G DozmorovDepartment of Biostatistics, Virginia Commonwealth University, Richmond, VA 23298, USA.
Patrick CoitDivision of Rheumatology, Department of Internal Medicine, University of Michigan, Ann Arbor, MI 48109, USA.
Kathleen Maksimowicz-McKinnonDivision of Rheumatology, Henry Ford Health System, Detroit, MI 48202, USA.
Amr H SawalhaDivision of Rheumatology, Department of Internal Medicine, University of Michigan, Ann Arbor, MI 48109, USA.
Henry Ford Health System · USMichigan Medicine · USUniversity of Michigan–Ann Arbor · USVirginia Commonwealth University · US

Funding

Role of DNA methylation in lupusR01AI097134 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Amr H Sawalha · 2013 to 2026
$4.5M
KIR+CD11ahiCD4+ T cells in Systemic AutoimmunityU19AI110502 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RICHARDSON, BRUCE C. · 2014 to 2018
$2.6M
NIAID NIH HHS R01 AI097134NIAID NIH HHS U19 AI110502
6 · The paper itself

Abstract

aimWe sought to define age-associated DNA methylation changes in naive CD4 MATERIALS &

methodsNaive CD4

resultsWe identified 11,431 age-associated CpG sites, 57% of which were hypermethylated with age. Hypermethylated sites were enriched in CpG islands and repressive transcription factor binding sites, while hypomethylated sites showed T cell specific enrichment in active enhancers marked by H3K27ac and H3K4me1. Our data emphasize cancer-related DNA methylation changes with age, and also reveal age-associated hypomethylation in immune-related pathways, such as T cell receptor signaling, FCγR-mediated phagocytosis, apoptosis and the mammalian target of rapamycin signaling pathway. The MAPK signaling pathway was hypermethylated with age, consistent with a defective MAPK signaling in aging T cells.

conclusionAge-associated DNA methylation changes may alter regulatory mechanisms and signaling pathways that predispose to autoimmunity.

Indexed as

AutoimmunityDNA MethylationAdultAgedAgingBinding SitesCD4-Positive T-LymphocytesCpG IslandsEnhancer Elements, GeneticEpigenesis, GeneticEpigenomicsEpitopes, T-LymphocyteFemaleHumansMiddle AgedPromoter Regions, GeneticEpitopes, T-LymphocyteTranscription FactorsagingautoimmunityCD4+ T cellsepigeneticsEZH2lupusmethylationmTORPRC2

Identifiers

PMID28322571
PMCPMC5549647
OpenAlexW2601730880

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.