Evidence map›Paper›PMID 28322269›Full record

ArticleScientific reports2017

A Ras GTPase associated protein is involved in the phototropic and circadian photobiology responses in fungi.

Silvia Polaino, José M Villalobos-Escobedo, Viplendra P S Shakya, Alejandro Miralles-Durán, Suman Chaudhary, Catalina Sanz, Mahdi Shahriari, Eva M Luque, Arturo P Eslava, Luis M Corrochano and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Review
  3. Light reception of Phycomyces revisited: several white collar proteins confer blue- and red-light sensitivity and control dynamic range and adaptation.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2024
    Review
  4. Review
  5. Article
  6. Article
  7. Transcriptome sequencing and global analysis of blue light-responsive genes provide clues for high carotenoid yields in Blakeslea trispora.International microbiology : the official journal of the Spanish Society for Microbiology · 2022
    Article
  8. Article
  9. Structure prediction and function characterization of WC-2 proteins in Blakeslea trispora.International microbiology : the official journal of the Spanish Society for Microbiology · 2021
    Article
  10. Article
  11. Mystique ofJournal of genetics · 2018
    Article
  12. Article
  13. Fungal Sex: The Mucoromycota.Microbiology spectrum · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Silvia PolainoDivision of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, USA.
José M Villalobos-EscobedoLaboratorio Nacional de Genómica para la Biodiversidad, CINVESTAV Sede Irapuato, Irapuato, Guanajuato, Mexico.
Viplendra P S ShakyaDivision of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, USA.
Alejandro Miralles-DuránDepartamento de Genética, Universidad de Sevilla, Sevilla, Spain.
Suman ChaudharyDivision of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, USA.
Catalina SanzDepartamento de Microbiología y Genética, Universidad de Salamanca, Salamanca, Spain.
Mahdi ShahriariDepartamento de Microbiología y Genética, Universidad de Salamanca, Salamanca, Spain.
Eva M LuqueDepartamento de Genética, Universidad de Sevilla, Sevilla, Spain.
Arturo P EslavaDepartamento de Microbiología y Genética, Universidad de Salamanca, Salamanca, Spain.
Luis M CorrochanoDepartamento de Genética, Universidad de Sevilla, Sevilla, Spain.
Alfredo Herrera-EstrellaLaboratorio Nacional de Genómica para la Biodiversidad, CINVESTAV Sede Irapuato, Irapuato, Guanajuato, Mexico.
Alexander IdnurmDivision of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, USA.
Universidad de Salamanca · ESUniversidad de Sevilla · ESUniversity of Missouri–Kansas City · USThe University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Light is an environmental signal perceived by most eukaryotic organisms and that can have major impacts on their growth and development. The MadC protein in the fungus Phycomyces blakesleeanus (Mucoromycotina) has been postulated to form part of the photosensory input for phototropism of the fruiting body sporangiophores, but the madC gene has remained unidentified since the 1960s when madC mutants were first isolated. In this study the madC gene was identified by positional cloning. All madC mutant strains contain loss-of-function point mutations within a gene predicted to encode a GTPase activating protein (GAP) for Ras. The madC gene complements the Saccharomyces cerevisiae Ras-GAP ira1 mutant and the encoded MadC protein interacts with P. blakesleeanus Ras homologs in yeast two-hybrid assays, indicating that MadC is a regulator of Ras signaling. Deletion of the homolog in the filamentous ascomycete Neurospora crassa affects the circadian clock output, yielding a pattern of asexual conidiation similar to a ras-1 mutant that is used in circadian studies in N. crassa. Thus, MadC is unlikely to be a photosensor, yet is a fundamental link in the photoresponses from blue light perceived by the conserved White Collar complex with Ras signaling in two distantly-related filamentous fungal species.

Indexed as

PhotobiologyAllelesBase SequenceChromosome MappingCircadian RhythmFungal ProteinsGene Expression ProfilingGene Expression Regulation, FungalGenes, FungalGenetic Complementation TestLightLoss of Function MutationPhenotypePhototropismPhycomycesras ProteinsFungal Proteinsras Proteins

Identifiers

PMID28322269
PMCPMC5359613
OpenAlexW2600624159

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.