Evidence map›Paper›PMID 28320402›Full record

ArticleBMC biology2017

Albugo-imposed changes to tryptophan-derived antimicrobial metabolite biosynthesis may contribute to suppression of non-host resistance to Phytophthora infestans in Arabidopsis thaliana.

David C Prince, Ghanasyam Rallapalli, Deyang Xu, Henk-Jan Schoonbeek, Volkan Çevik, Shuta Asai, Eric Kemen, Neftaly Cruz-Mireles, Ariane Kemen, Khaoula Belhaj and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
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  6. Overexpression ofMetabolites · 2023
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  9. Review
  10. Exploiting breakdown in nonhost effector-target interactions to boost host disease resistance.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  11. Activation of the VQ Motif-Containing Protein GenePlants (Basel, Switzerland) · 2022
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  12. Review
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  18. Oomycetes Used in Arabidopsis Research.The arabidopsis book · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

David C PrinceThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Ghanasyam RallapalliThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Deyang XuDynaMo Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, 40 Thorvaldsensvej, DK-1871, Frederiksberg C, Denmark.
Henk-Jan SchoonbeekDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
Volkan ÇevikThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Shuta AsaiThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Eric KemenThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Neftaly Cruz-MirelesThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Ariane KemenThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Khaoula BelhajThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Sebastian SchornackThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Sophien KamounThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom.
Eric B HolubSchool of Life Sciences, Warwick Crop Centre, University of Warwick, Wellesbourne, UK.
Barbara A HalkierDynaMo Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, 40 Thorvaldsensvej, DK-1871, Frederiksberg C, Denmark.
Jonathan D G JonesThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom. jonathan.jones@tsl.ac.uk.
Norwich Research Park · GBSainsbury Laboratory · GBUniversity of Copenhagen · DKMax Planck Institute for Plant Breeding Research · DEUniversity of East Anglia · GBUniversity of Warwick · GB

Funding

Biotechnology and Biological Sciences Research Council BB/G042960/1Biotechnology and Biological Sciences Research Council BB/K003550/1Biotechnology and Biological Sciences Research Council BB/M003809/1Biotechnology and Biological Sciences Research Council BB/M008193/1European Research Council 233376
6 · The paper itself

Abstract

backgroundPlants are exposed to diverse pathogens and pests, yet most plants are resistant to most plant pathogens. Non-host resistance describes the ability of all members of a plant species to successfully prevent colonization by any given member of a pathogen species. White blister rust caused by Albugo species can overcome non-host resistance and enable secondary infection and reproduction of usually non-virulent pathogens, including the potato late blight pathogen Phytophthora infestans on Arabidopsis thaliana. However, the molecular basis of host defense suppression in this complex plant-microbe interaction is unclear. Here, we investigate specific defense mechanisms in Arabidopsis that are suppressed by Albugo infection.

resultsGene expression profiling revealed that two species of Albugo upregulate genes associated with tryptophan-derived antimicrobial metabolites in Arabidopsis. Albugo laibachii-infected tissue has altered levels of these metabolites, with lower indol-3-yl methylglucosinolate and higher camalexin accumulation than uninfected tissue. We investigated the contribution of these Albugo-imposed phenotypes to suppression of non-host resistance to P. infestans. Absence of tryptophan-derived antimicrobial compounds enables P. infestans colonization of Arabidopsis, although to a lesser extent than Albugo-infected tissue. A. laibachii also suppresses a subset of genes regulated by salicylic acid; however, salicylic acid plays only a minor role in non-host resistance to P. infestans.

conclusionsAlbugo sp. alter tryptophan-derived metabolites and suppress elements of the responses to salicylic acid in Arabidopsis. Albugo sp. imposed alterations in tryptophan-derived metabolites may play a role in Arabidopsis non-host resistance to P. infestans. Understanding the basis of non-host resistance to pathogens such as P. infestans could assist in development of strategies to elevate food security.

Indexed as

Biosynthetic PathwaysAnti-Infective AgentsArabidopsisBiomassBrassicaDisease ResistanceDisease SusceptibilityGene Expression ProfilingGene Expression Regulation, PlantGene OntologyGenes, PlantGlucosinolatesIndolesMetabolic Networks and PathwaysMutationPhytoalexinsAnti-Infective AgentscamalexinGlucosinolatesIndolesPhytoalexinsSalicylic AcidThiazolesTryptophanAlbugoArabidopsis thalianaCamalexinGlucosinolatesNon-host resistancePhytophthora infestansSalicylic acid

Identifiers

PMID28320402
PMCPMC5358052
OpenAlexW2603568896

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.