Evidence map›Paper›PMID 28320388›Full record

ArticleWorld journal of surgical oncology2017

Exploring the FGFR3-related oncogenic mechanism in bladder cancer using bioinformatics strategy.

Wei Cao, Enguang Ma, Li Zhou, Tan Yuan, Chunying Zhang

Open access · goldAbstract read
In one paragraph

Article in World journal of surgical oncology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Wei CaoDepartment of Urinary Surgery, The Second Affiliated Hospital of Harbin Medical University, 150086, Harbin, Heilongjiang province, China.
Enguang MaDepartment of Urinary Surgery, Harbin First Hospital, 150010, Harbin, Heilongjiang province, China.
Li ZhouDepartment of Urinary Surgery, The Second Affiliated Hospital of Harbin Medical University, 150086, Harbin, Heilongjiang province, China.
Tan YuanDepartment of Urinary Surgery, The Second Affiliated Hospital of Harbin Medical University, 150086, Harbin, Heilongjiang province, China.
Chunying ZhangDepartment of Urinary Surgery, The Second Affiliated Hospital of Harbin Medical University, 150086, Harbin, Heilongjiang province, China. ZhangCY662@163.com.
Harbin Medical University · CNSecond Affiliated Hospital of Harbin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAberrant activation of fibroblast growth factor receptor 3 (FGFR3) is frequently observed in bladder cancer, but how it involved in carcinogenesis is not well understood. The current study was aimed to investigate the underlying mechanism on the progression of bladder cancer.

methodsThe GSE41035 dataset downloaded from Gene Expression Omnibus was used to identify the differentially expressed genes (DEGs) between bladder cancer cell line RT112 with or without depletion of FGFR3, and gene ontology enrichment analysis was performed. Then, FGFR3-centered protein-protein interaction (PPI) and regulatory networks were constructed. Combined with the data retrieved from GSE31684, prognostic makers for bladder cancer were predicted.

resultsWe identified a total of 2855 DEGs, and most of them were associated with blood vessel morphogenesis and cell division. In addition, KIAA1377, POLA2, FGFR3, and EPHA4 were the hub genes with high degree in the FGFR3-centered PPI network. Besides, 17 microRNAs (miRNAs) and 6 transcriptional factors (TFs) were predicted to be the regulators of the nodes in PPI network. Moreover, CSTF2, POLA1, HMOX2, and EFNB2 may be associated with the prognosis of bladder cancer patient.

conclusionsThe current study may provide some insights into the molecular mechanism of FGFR3 as a mediator in bladder cancer.

Indexed as

Gene Regulatory NetworksBiomarkers, TumorComputational BiologyGene Expression ProfilingGene Expression Regulation, NeoplasticGene OntologyHumansNeoplasm StagingPrognosisProtein Interaction MapsReceptor, Fibroblast Growth Factor, Type 3Survival RateUrinary Bladder NeoplasmsBiomarkers, TumorFGFR3 protein, humanReceptor, Fibroblast Growth Factor, Type 3Bladder cancerDifferentially expressed geneFibroblast growth factor receptor 3Prognostic makerProtein–protein interaction network

Identifiers

PMID28320388
PMCPMC5359882
OpenAlexW2599587123

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.