Evidence map›Paper›PMID 28319645›Full record

ArticleMolecular nutrition & food research2017

The atypical genesis and bioavailability of the plant-based small RNA MIR2911: Bulking up while breaking down.

Jian Yang, Natee Kongchan, Cecilia Primo Planta, Joel R Neilson, Kendal D Hirschi

Open access · greenAbstract read
In one paragraph

Article in Molecular nutrition & food research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
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  3. Plant-derived xenomiRs and cancer: Cross-kingdom gene regulation.Saudi journal of biological sciences · 2021
    Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jian YangUSDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA.
Natee KongchanDepartment of Molecular Biology and Biophysics, Baylor College of Medicine, Houston, TX, USA.
Cecilia Primo PlantaUSDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA.
Joel R NeilsonDepartment of Molecular Biology and Biophysics, Baylor College of Medicine, Houston, TX, USA.
Kendal D HirschiUSDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA.
Children's Nutrition Research Center at Baylor College of Medicine · USBaylor College of Medicine · US

Funding

Translational control of EMT by the CELF1 RNA Binding ProteinR01CA190467 · NCI · BAYLOR COLLEGE OF MEDICINE · PI NEILSON, JOEL R · 2015 to 2021
$1.9M
Prospective Identification of Translational Regulators in EMTR21CA185769 · NCI · BAYLOR COLLEGE OF MEDICINE · PI NEILSON, JOEL R · 2015 to 2016
$379k
NCI NIH HHS R01 CA190467NCI NIH HHS R21 CA185769
6 · The paper itself

Abstract

scopeThe uptake of dietary plant small RNAs (sRNAs) in consumers remains controversial, which is mainly due to low dietary content in combination with poor fractional absorption. MIR2911, among all the plant sRNAs including microRNAs, has been shown to be one of the most robustly absorbed sRNAs. Here we analyze the unusual abundance and unique genesis of MIR2911 during vegetable processing. METHODS AND

resultsUsing qRT-PCR, the abundance of MIR2911 increased dramatically in macerated tissues while other microRNAs degraded. The accumulation of MIR2911 correlated with the degradation of the rRNAs, consistent with MIR2911 being derived from the 26S rRNA. Bioinformatic analysis predicts a microRNA-like precursor structure for MIR2911; however, no reciprocal increase in the putative star-strand was noted, and using an Arabidopsis mutation deficient in miRNA processing the accumulation of MIR2911 appeared Dicer independent. MIR2911 was incorporated into the mammalian RNA-induced silencing complex as demonstrated in HEK293T cells, where transfected synthetic MIR2911 modestly suppressed the activity of a cognate luciferase reporter.

conclusionThe genesis and amplification of MIR2911 post-harvest is atypical, as traditional plant bioactives are less plentiful as vegetables lose freshness. These findings offer an explanation to the disparity in serum detection between MIR2911 and canonical plant-based miRNAs.

Indexed as

Biological AvailabilityBrassicaFood HandlingHEK293 CellsHumansMicroRNAsRNA, PlantMicroRNAsRNA, PlantAbsorptionBioavailabilityFood consumption markerMicroRNAVegetables

Identifiers

PMID28319645
PMCPMC5583006
OpenAlexW2601366106

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.