Evidence map›Paper›PMID 28319091›Full record

ArticleNature genetics2017

Whole-genome sequencing identifies rare genotypes in COMP and CHADL associated with high risk of hip osteoarthritis.

Unnur Styrkarsdottir, Hannes Helgason, Asgeir Sigurdsson, Gudmundur L Norddahl, Arna B Agustsdottir, Louise N Reynard, Amanda Villalvilla, Gisli H Halldorsson, Aslaug Jonasdottir, Audur Magnusdottir and 39 more

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 50 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 5 pooled it
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 5 syntheses or guidelines pooled it, 94 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Human hip osteoarthritis-associatedbioRxiv : the preprint server for biology · 2026
    Article
  7. Article
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  10. Review
  11. Article
  12. Article
  13. Review
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  15. Article
  16. Review
  17. Article
  18. Article
  19. Multi-omics molecular biomarkers and database of osteoarthritis.Database : the journal of biological databases and curation · 2022
    Article
  20. Genetics of osteoarthritis.Osteoarthritis and cartilage · 2022
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

49 authors at 15 institutions in 11 countries.

Unnur StyrkarsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0001-8146-8278
Hannes HelgasondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Asgeir SigurdssondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Gudmundur L NorddahldeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Arna B AgustsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Louise N ReynardInstitute of Genetic Medicine, Newcastle University, Newcastle-upon-Tyne, UK.
Amanda VillalvillaInstitute of Genetic Medicine, Newcastle University, Newcastle-upon-Tyne, UK.
Gisli H HalldorssondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Aslaug JonasdottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Audur MagnusdottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Asmundur OddsondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-4606-5163
Gerald SulemdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Florian ZinkdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Gardar SveinbjornssondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Agnar HelgasondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Hrefna S JohannsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Anna HelgadottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Hreinn StefanssondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Solveig GretarsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Thorunn RafnardeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Ina S AlmdahlDepartment of Neurology, Akershus University Hospital, Lørenskog, Norway.
Anne BrækhusNorwegian National Advisory Unit on Ageing and Health, Vestfold Hospital Trust, Tønsberg, Norway.
Tormod FladbyDepartment of Neurology, Akershus University Hospital, Lørenskog, Norway.
Geir SelbækNorwegian National Advisory Unit on Ageing and Health, Vestfold Hospital Trust, Tønsberg, Norway.
Farhad HosseinpanahObesity Research Center, Research Institute for Endocrine Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Fereidoun AziziEndocrine Research Center, Research Institute for Endocrine Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Jung Min KohDivision of Endocrinology and Metabolism, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea.
Nelson L S TangDepartment of Chemical Pathology and Laboratory for Genetics of Disease Susceptibility, Li Ka Shing Institute of Health Sciences, and School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong, China.ORCID http://orcid.org/0000-0002-3607-5819
Maryam S DaneshpourCellular and Molecular Endocrine Research Center, Research Institute for Endocrine Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Jose I MayordomoDivision of Medical Oncology, Lozano Blesa University Hospital, Zaragoza, Spain.
Corrine WeltDivision of Endocrinology, Metabolism and Diabetes, University of Utah, Salt Lake City, Utah, USA.
Peter S BraundDepartment of Cardiovascular Sciences, University of Leicester, Leicester, UK.
Nilesh J SamaniDepartment of Cardiovascular Sciences, University of Leicester, Leicester, UK.
Lambertus A KiemeneyRadboud University Medical Center, Radboud Institute for Health Science, Nijmegen, the Netherlands.
L Stefan LohmanderOrthopaedics, Department of Clinical Sciences Lund, Lund University, Lund, Sweden.ORCID http://orcid.org/0000-0002-5424-9448
Claus ChristiansenNordic Bioscience, Herlev, Denmark.
Ole A AndreassenNORMENT, KG Jebsen Centre for Psychosis Research, Division of Mental Health and Addiction, Oslo University Hospital and Institute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID http://orcid.org/0000-0002-4461-3568
arcOGEN consortium
Olafur MagnussondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Gisli MassondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Augustine KongdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Ingileif JonsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0001-8339-150X
Daniel GudbjartssondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-5222-9857
Patrick SulemdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0001-7123-6123
Helgi JonssonFaculty of Medicine, University of Iceland, Reykjavik, Iceland.
John LoughlinInstitute of Genetic Medicine, Newcastle University, Newcastle-upon-Tyne, UK.
Thorvaldur IngvarssonFaculty of Medicine, University of Iceland, Reykjavik, Iceland.
Unnur ThorsteinsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
Kari StefanssondeCODE Genetics/Amgen, Inc., Reykjavik, Iceland.
deCODE Genetics (Iceland) · ISNewcastle University · GBResearch Institute for Endocrine Sciences · IROslo University Hospital · NOUniversity of Iceland · ISUniversity of Leicester · GBUniversity of Oslo · NOAkershus University Hospital · NOChinese University of Hong Kong · HKHospital Clínico Universitario Lozano Blesa · ESLund University · SENordic Bioscience (Denmark) · DKRadboud University Nijmegen · NLUlsan College · KRUniversity of Utah · US

Funding

Medical Research Council G0100594Medical Research Council G0600237Medical Research Council G0900753Medical Research Council G0901461Medical Research Council MR/K002279/1Medical Research Council MR/K006312/1Versus Arthritis 20679Versus Arthritis 20771
6 · The paper itself

Abstract

We performed a genome-wide association study of total hip replacements, based on variants identified through whole-genome sequencing, which included 4,657 Icelandic patients and 207,514 population controls. We discovered two rare signals that strongly associate with osteoarthritis total hip replacement: a missense variant, c.1141G>C (p.Asp369His), in the COMP gene (allelic frequency = 0.026%, P = 4.0 × 10

Indexed as

Arthroplasty, Replacement, HipCartilage Oligomeric Matrix ProteinCells, CulturedCodon, NonsenseExtracellular Matrix ProteinsFrameshift MutationGene ExpressionGene FrequencyGenetic Predisposition to DiseaseGenome, HumanGenome-Wide Association StudyGenotypeHumansIcelandKaplan-Meier EstimateMutation, MissenseCartilage Oligomeric Matrix ProteinCHADL protein, humanCodon, NonsenseExtracellular Matrix ProteinsTSP5 protein, human

Identifiers

PMID28319091
OpenAlexW2598683998

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.