Evidence map›Paper›PMID 28318472›Full record

ArticleEpidemiology and infection2017

Antimicrobial resistance, penicillin-binding protein sequences, and pilus islet carriage in relation to clonal evolution of Streptococcus pneumoniae serotype 19A in Russia, 2002-2013.

N Mayanskiy, T Savinova, N Alyabieva, O Ponomarenko, E Brzhozovskaya, A Lazareva, L Katosova, R Kozlov

Open access · bronzeAbstract read
In one paragraph

Article in Epidemiology and infection, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Genomic characterization ofMicrobial genomics · 2025
    Article
  4. Pilus ofFrontiers in cellular and infection microbiology · 2023
    Review
  5. Article
  6. The Emergence of InvasiveFrontiers in microbiology · 2021
    Article
  7. The prevalence of pilus islets inAccess microbiology · 2021
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

N MayanskiyScientific Centre of Children's Health 119991,Lomonosovskiy avenue, 2,Moscow,Russia.
T SavinovaScientific Centre of Children's Health 119991,Lomonosovskiy avenue, 2,Moscow,Russia.
N AlyabievaScientific Centre of Children's Health 119991,Lomonosovskiy avenue, 2,Moscow,Russia.
O PonomarenkoScientific Centre of Children's Health 119991,Lomonosovskiy avenue, 2,Moscow,Russia.
E BrzhozovskayaScientific Centre of Children's Health 119991,Lomonosovskiy avenue, 2,Moscow,Russia.
A LazarevaScientific Centre of Children's Health 119991,Lomonosovskiy avenue, 2,Moscow,Russia.
L KatosovaScientific Centre of Children's Health 119991,Lomonosovskiy avenue, 2,Moscow,Russia.
R KozlovInstitute of Antimicrobial Chemotherapy, Smolensk State Medical University 214019,46-A Kirova Street,P.O. Box 5,Smolensk,Russia.
Scientific Center of Children's Health · RUSmolensk State Medical University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clonal changes of serotype 19A pneumococci have been appreciated in conjunction with growing prevalence of this serotype after implementation of the seven-valent pneumococcal conjugate vaccine (PCV7). In the present study, we characterized serotype 19A pneumococci collected in Russia within a decade preceding the implementation of PCV vaccination and described their clonal evolution. We retrospectively analyzed non-invasive serotype 19A isolates collected in 2002-2013. All isolates were subjected to multilocus sequence typing, antimicrobial susceptibility testing, determination of macrolide resistance genotype, molecular detection of pilus islet (PI) carriage, sequencing of penicillin-binding protein (PBP) genes. A total of 49 serotype 19A isolates represented 25 sequence types, of which 14 were newly described. The majority of isolates were distributed among clonal complex (CC) 663 (28%), CC230 (25%), CC156, and CC320 (14% each). CC663 and CC156 dominated in 2003, but were replaced by CC230 and CC320 later on; CC320 was only evident starting 2010. All isolates of CC663 and CC156 carried PI1; CC320 possessed both PI1 and PI2. The overall rate of altered amino acids in penicillin-nonsusceptible isolates was 13·9%, 7·2%, and 8·7% for PBP1a, PBP2b, and PBP2x, respectively. Our findings demonstrate that the clonal structure of serotype 19A pneumococci may evolve without PCV pressure.

Indexed as

Drug Resistance, BacterialAnti-Infective AgentsChild, PreschoolClone CellsFimbriae, BacterialGenetic VariationHeptavalent Pneumococcal Conjugate VaccineHumansInfantPenicillin-Binding ProteinsPhylogenyPneumococcal InfectionsPrevalenceRetrospective StudiesRussiaSequence Analysis, DNAAnti-Infective AgentsHeptavalent Pneumococcal Conjugate VaccinePenicillin-Binding ProteinsAntimicrobial resistancemultilocus sequence typingpenicillin-binding proteinpneumococcusserotype 19A

Identifiers

PMID28318472
PMCPMC9203313
OpenAlexW2600655940

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.