Evidence map›Paper›PMID 28317293›Full record

ArticlePlant biotechnology journal2017

A new location to split Cre recombinase for protein fragment complementation.

Maryam Rajaee, David W Ow

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  5. Article
  6. Target Lines forInternational journal of molecular sciences · 2022
    Article
  7. Split-Cre mediated deletion of DNA no longer needed after site-specific integration in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  8. Article
  9. Article
  10. AJournal of bacteriology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Maryam RajaeePlant Gene Engineering Center, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China.
David W OwPlant Gene Engineering Center, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China.
South China Botanical Garden · CNUniversity of Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have previously described a recombinase-mediated gene stacking system in which the Cre recombinase is used to remove lox-site flanked DNA no longer needed after each round of Bxb1 integrase-mediated site-specific integration. The Cre recombinase can be conveniently introduced by hybridization with a cre-expressing plant. However, maintaining an efficient cre-expressing line over many generations can be a problem, as high production of this DNA-binding protein might interfere with normal chromosome activities. To counter this selection against high Cre activity, we considered a split-cre approach, in which Cre activity is reconstituted after separate parts of Cre are brought into the same genome by hybridization. To insure that the recombinase-mediated gene stacking system retains its freedom to operate, we tested for new locations to split Cre into complementing fragments. In this study, we describe testing four new locations for splitting the Cre recombinase for protein fragment complementation and show that the two fragments of Cre split between Lys244 and Asn245 can reconstitute activity that is comparable to that of wild-type Cre.

Indexed as

ArabidopsisDNA-Binding ProteinsDNA, PlantEscherichia coliGene Expression Regulation, EnzymologicGenetic Complementation TestGenetic EngineeringGenome, PlantHybridization, GeneticIntegrasesPeptide FragmentsPlants, Genetically ModifiedProtein Structure, QuaternaryRecombinasesRecombination, GeneticCre recombinaseDNA-Binding ProteinsDNA, PlantIntegrasesPeptide FragmentsRecombinasesalpha-complementationgene stackingprotein fragment complementationsite-specific recombination

Identifiers

PMID28317293
PMCPMC5633763
OpenAlexW2594968059

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.