Evidence map›Paper›PMID 28316791›Full record

ReviewRegeneration (Oxford, England)2017

Epigenetic memory and cell fate reprogramming in plants.

Kenneth D Birnbaum, François Roudier

Open access · hybridAbstract readReview
In one paragraph

Review in Regeneration (Oxford, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
14.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. What Is a Plant Cell Type in the Age of Single-Cell Biology? It's Complicated.Annual review of cell and developmental biology · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Unraveling Epigenetic Changes inPlants (Basel, Switzerland) · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Kenneth D BirnbaumCenter for Genomics and Systems Biology New York University 12 Waverly Place, New York NY 10003 USA.
François RoudierInstitut de Biologie de l'Ecole Normale Supérieure, Centre National de la Recherche Scientifique (CNRS) UMR 8197 Institut National de la Santé et de la Recherche Médicale (INSERM) U1024 Ecole Normale Supérieure, 46 rue d'Ulm, 75230 Paris Cedex 05 France; Laboratoire de Reproduction et Développement des Plantes, Centre National de la Recherche Scientifique (CNRS) UMR 5667, Institut National de la Recherche Agronomique (INRA) UMR 879, Ecole Normale Supérieure de LyonUniversité Lyon 1 (UCBL) 46 Allée d'Italie, 69364 Lyon Cedex 07 France.
New York University · USUniversité Claude Bernard Lyon 1 · FR

Funding

Mapping the Trajectory of Cell Fate TransitionsR01GM078279 · NIGMS · NEW YORK UNIVERSITY · PI BIRNBAUM, KENNETH DAVID · 2006 to 2019
$4.2M
NIGMS NIH HHS R01 GM078279
6 · The paper itself

Abstract

Plants have a high intrinsic capacity to regenerate from adult tissues, with the ability to reprogram adult cell fates. In contrast, epigenetic mechanisms have the potential to stabilize cell identity and maintain tissue organization. The question is whether epigenetic memory creates a barrier to reprogramming that needs to be erased or circumvented in plant regeneration. Early evidence suggests that, while chromatin dynamics impact gene expression in the meristem, a lasting constraint on cell fate is not established until late stages of plant cell differentiation. It is not yet clear whether the plasticity of plant cells arises from the ability of cells to erase identity memory or to deploy cells that may exhibit cellular specialization but still lack an epigenetic restriction on cell fate alteration.

Indexed as

cellular reprogrammingchromatin remodelingDNA methylationepigenetic memoryplantspolycomb group complexregeneration

Identifiers

PMID28316791
PMCPMC5350078
OpenAlexW2534510019

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.