Evidence map›Paper›PMID 28316655›Full record

ArticleJournal of cheminformatics2017

ExCAPE-DB: an integrated large scale dataset facilitating Big Data analysis in chemogenomics.

Jiangming Sun, Nina Jeliazkova, Vladimir Chupakin, Jose-Felipe Golib-Dzib, Ola Engkvist, Lars Carlsson, Jörg Wegner, Hugo Ceulemans, Ivan Georgiev, Vedrin Jeliazkov and 3 more

Erratum issuedAbstract read
In one paragraph

Article in Journal of cheminformatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed.

  1. Article
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  11. Generative Deep Learning for de Novo Drug Design─A Chemical Space Odyssey.Journal of chemical information and modeling · 2025
    Review
  12. MGMG: Cell Morphology-Guided Molecule Generation for Drug Discovery.bioRxiv : the preprint server for biology · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Jiangming SunDiscovery Sciences, Innovative Medicines and Early Development Biotech Unit, AstraZeneca R&D Gothenburg, 43183 Mölndal, Sweden.
Nina JeliazkovaIdeaconsult Ltd., 4. Angel Kanchev Str., 1000 Sofia, Bulgaria.
Vladimir ChupakinComputational Biology, Discovery Sciences, Janssen Pharmaceutica NV, Turnhoutseweg 30, 2349 Beerse, Belgium.
Jose-Felipe Golib-DzibComputational Biology, Discovery Sciences, Janssen Cilag SA, Calle Río Jarama, 71A, 45007 Toledo, Spain.
Ola EngkvistDiscovery Sciences, Innovative Medicines and Early Development Biotech Unit, AstraZeneca R&D Gothenburg, 43183 Mölndal, Sweden.
Lars CarlssonDiscovery Sciences, Innovative Medicines and Early Development Biotech Unit, AstraZeneca R&D Gothenburg, 43183 Mölndal, Sweden.
Jörg WegnerComputational Biology, Discovery Sciences, Janssen Pharmaceutica NV, Turnhoutseweg 30, 2349 Beerse, Belgium.
Hugo CeulemansComputational Biology, Discovery Sciences, Janssen Pharmaceutica NV, Turnhoutseweg 30, 2349 Beerse, Belgium.
Ivan GeorgievIdeaconsult Ltd., 4. Angel Kanchev Str., 1000 Sofia, Bulgaria.
Vedrin JeliazkovIdeaconsult Ltd., 4. Angel Kanchev Str., 1000 Sofia, Bulgaria.
Nikolay KochevIdeaconsult Ltd., 4. Angel Kanchev Str., 1000 Sofia, Bulgaria.
Thomas J AshbyImec vzw, Kappeldreef 75, 3001 Louvain, Belgium.
Hongming ChenDiscovery Sciences, Innovative Medicines and Early Development Biotech Unit, AstraZeneca R&D Gothenburg, 43183 Mölndal, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chemogenomics data generally refers to the activity data of chemical compounds on an array of protein targets and represents an important source of information for building

Indexed as

Big DataBioactivityChemical structureChemogenomicsMolecular fingerprintsQSARSearch engine

Identifiers

PMID28316655
PMCPMC5340785

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.