ArticleThe Plant cell2017
Widespread Contamination of Arabidopsis Embryo and Endosperm Transcriptome Data Sets.
Article in The Plant cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.
What it found
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Who cites it
54 citing papers in PubMed.
- Molecular characterization of capulet2 reveals the importance of ANAPHASE PROMOTING COMPLEX 6 maternal expression in endosperm development.Plant physiology · 2026Article
- DNA methylation remodeling reveals epigenetic regulation of early embryogenesis in Arabidopsis hybrid.Communications biology · 2026Article
- Bioinformatics insights into plant genomic imprinting: approaches, challenges, and future perspectives.Briefings in functional genomics · 2026Review
- Decoding hybridization barriers: the molecular and genetic orchestration of the triploid block in Arabidopsis thaliana.BMC plant biology · 2025Review
- Developmental phylotranscriptomics in grapevine suggests an ancestral role of somatic embryogenesis.Communications biology · 2025Article
- How parental factors shape the plant embryo.Biochemical Society transactions · 2025Article
- Dissecting the cellular architecture and genetic circuitry of the soybean seed.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Multilayered epigenetic control of persistent and stage-specific imprinted genes in rice endosperm.Nature plants · 2024Article
- Imprinting but not cytonuclear interactions determines seed size heterosis in Arabidopsis hybrids.Plant physiology · 2024Article
- The conservation of allelic DNA methylation and its relationship with imprinting in maize.Journal of experimental botany · 2024Article
- Small RNA-mediated DNA methylation during plant reproduction.The Plant cell · 2023Review
- Endosperm cellularization failure induces a dehydration-stress response leading to embryo arrest.The Plant cell · 2023Article
- Parents, time, and space: The three dimensions of endosperm gene expression.Plant physiology · 2023Article
- Spatial and temporal regulation of parent-of-origin allelic expression in the endosperm.Plant physiology · 2023Article
- Design, execution, and interpretation of plant RNA-seq analyses.Frontiers in plant science · 2023Review
- Polycomb-mediated repression of paternal chromosomes maintains haploid dosage in diploid embryos ofeLife · 2022Article
- RNA Pol IV induces antagonistic parent-of-origin effects on Arabidopsis endosperm.PLoS biology · 2022Article
- Loss of linker histone H1 in the maternal genome influences DEMETER-mediated demethylation and affects the endosperm DNA methylation landscape.Frontiers in plant science · 2022Article
- miR160 InteractsFrontiers in plant science · 2022Article
- Epigenetic modifications potentially controlling the allelic expression of imprinted genes in sunflower endosperm.BMC plant biology · 2021Article
Corrections and comments
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A major goal of global gene expression profiling in plant seeds has been to investigate the parental contributions to the transcriptomes of early embryos and endosperm. However, consistency between independent studies has been poor, leading to considerable debate. We have developed a statistical tool that reveals the presence of substantial RNA contamination from maternal tissues in nearly all published
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Registered trials
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