Evidence map›Paper›PMID 28303935›Full record

ArticleScientific reports2017

Multiscale microenvironmental perturbation of pluripotent stem cell fate and self-organization.

Yoji Tabata, Matthias P Lutolf

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. From genes to germ layers: virtual twins of gastruloids.NPJ systems biology and applications · 2026
    Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. How might we build limbsFrontiers in cell and developmental biology · 2023
    Review
  7. Review
  8. Towards organoid culture without Matrigel.Communications biology · 2021
    Review
  9. Single-Cell Microgels for Diagnostics and Therapeutics.Advanced functional materials · 2021
    Article
  10. Article
  11. Review
  12. Article
  13. Patterning Neuroepithelial Cell SheetACS biomaterials science & engineering · 2021
    Article
  14. Engineering organoids.Nature reviews. Materials · 2021
    Review
  15. Article
  16. Engineering Heart Morphogenesis.Trends in biotechnology · 2020
    Review
  17. Article
  18. Article
  19. Article
  20. Progress and potential in organoid research.Nature reviews. Genetics · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yoji TabataLaboratory of Stem Cell Bioengineering, Institute of Bioengineering, School of Life Sciences and School of Engineering, École Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland.
Matthias P LutolfLaboratory of Stem Cell Bioengineering, Institute of Bioengineering, School of Life Sciences and School of Engineering, École Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The combination of microfluidics with engineered three-dimensional (3D) matrices can bring new insights into the fate regulation of stem cells and their self-organization into organoids. Although there has been progress in 3D stem cell culturing, most existing in vitro methodologies do not allow for mimicking of the spatiotemporal heterogeneity of stimuli that drive morphogenetic processes in vivo. To address this, we present a perfusion-free microchip concept for the in vitro 3D perturbation of stem cell fate. Stem cells are encapsulated in a hydrogel compartment that is flanked by open reservoirs for the diffusion-driven generation of biomolecule gradients. Juxtaposing additional compartments bearing supportive cells enables investigating the influence of long range cell-cell communication. We explore the utility of the microchips in manipulating early fate choices and self-organizing characteristics of 3D-cultured mouse embryonic stem cells (mESCs) under neural differentiation conditions and exposure to gradients of leukemia inhibitory factor (LIF). mESCs respond to LIF gradients in a spatially dependent manner. At higher LIF concentrations, multicellular colonies maintain pluripotency in contrast, at lower concentrations, mESCs develop into apicobasally polarized epithelial cysts. This versatile system can help to systematically explore the role of multifactorial microenvironments in promoting self-patterning of various stem cell types.

Indexed as

Cell LineageCellular MicroenvironmentAnimalsCells, CulturedDiffusionExtracellular MatrixLeukemia Inhibitory FactorMiceMicrofluidicsMicrotechnologyMouse Embryonic Stem CellsPluripotent Stem CellsSolubilityLeukemia Inhibitory Factor

Identifiers

PMID28303935
PMCPMC5356187

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.