Evidence map›Paper›PMID 28303436›Full record

ArticleJournal of molecular modeling2017

Mutations in catalase-peroxidase KatG from isoniazid resistant Mycobacterium tuberculosis clinical isolates: insights from molecular dynamics simulations.

Arethusa Lobo Pimentel, Regiane Bertin de Lima Scodro, Katiany Rizzieri Caleffi-Ferracioli, Vera Lúcia Dias Siqueira, Paula Aline Zanetti Campanerut-Sá, Luciana Dias Ghiraldi Lopes, Aryadne Larissa de Almeida, Rosilene Fressatti Cardoso, Flavio Augusto Vicente Seixas

Abstract read
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In one paragraph

Article in Journal of molecular modeling, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Combining structure and genomics to understand antimicrobial resistance.Computational and structural biotechnology journal · 2020
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Arethusa Lobo PimentelDepartamento de Bioquímica, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil.
Regiane Bertin de Lima ScodroDepartamento de Análises Clínicas e Biomedicina, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil.
Katiany Rizzieri Caleffi-FerracioliDepartamento de Análises Clínicas e Biomedicina, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil.
Vera Lúcia Dias SiqueiraDepartamento de Análises Clínicas e Biomedicina, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil.
Paula Aline Zanetti Campanerut-SáDepartamento de Análises Clínicas e Biomedicina, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil.
Luciana Dias Ghiraldi LopesDepartamento de Análises Clínicas e Biomedicina, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil.
Aryadne Larissa de AlmeidaDepartamento de Análises Clínicas e Biomedicina, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil.
Rosilene Fressatti CardosoDepartamento de Análises Clínicas e Biomedicina, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil.
Flavio Augusto Vicente SeixasDepartamento de Bioquímica, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Maringá, PR, Brazil. favseixas@uem.br.ORCID http://orcid.org/0000-0002-0117-6919
Universidade Estadual de Maringá · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The current multidrug therapy for tuberculosis (TB) is based on the use of isoniazid (INH) in combination with other antibiotics such as rifampin, ethambutol and pyrazinamide. Literature reports have shown that Mycobacterium tuberculosis, the causative agent of TB, has become resistant to this treatment by means of point mutations in the target enzymes of these drugs, such as catalase-peroxidase (KatG). By means of equilibrium molecular dynamics in the presence of the ligand, this work evaluated ten point mutations described in the enzyme KatG that are related to resistance to INH . The results showed that the resistance mechanism is related to stereochemical modifications at the N-terminal domain of the protein, which restrict INH access to its catalytic site, not involving mechanisms of electrostatic nature. These results show insights that can be useful for the identification of new anti-TB drugs which may be able to circumvent this mechanism of resistance.

Indexed as

Drug Resistance, BacterialMolecular Dynamics SimulationMutationAntitubercular AgentsBacterial ProteinsCatalaseCatalytic DomainIsoniazidLigandsMycobacterium tuberculosisAntitubercular AgentsBacterial ProteinsCatalaseIsoniazidkatG protein, Mycobacterium tuberculosisLigandsCatalase-peroxidaseDrug resistanceIsoniazidMycobacterium tuberculosis

Identifiers

PMID28303436
OpenAlexW2596877760

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.