Evidence map›Paper›PMID 28303256›Full record

ArticleeNeuro

Recurring Functional Interactions Predict Network Architecture of Interictal and Ictal States in Neocortical Epilepsy.

Ankit N Khambhati, Danielle S Bassett, Brian S Oommen, Stephanie H Chen, Timothy H Lucas, Kathryn A Davis, Brian Litt

Open access · goldAbstract read
In one paragraph

Article in eNeuro. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 2 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 2 syntheses or guidelines pooled it, 49 citations in OpenAlex.

  1. Pooled it
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  15. Seizure pathways change on circadian and slower timescales in individual patients with focal epilepsy.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. Article
  17. Review
  18. Article
  19. Homeostatic Plasticity in Epilepsy.Frontiers in cellular neuroscience · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ankit N KhambhatiDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104; Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104.ORCID 0000-0001-6182-4677
Danielle S BassettDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104; Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104; Department of Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, PA 19104.
Brian S OommenPenn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104; Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104.
Stephanie H ChenPenn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104; Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104.
Timothy H LucasPenn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104; Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia, PA 19104.
Kathryn A DavisPenn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104; Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104.ORCID 0000-0002-7020-6480
Brian LittDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104; Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104; Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104.ORCID 0000-0003-2732-6927
Hospital of the University of Pennsylvania · USCalifornia University of Pennsylvania · US

Funding

The International epilepsy electrophysiology databaseU24NS063930 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI LITT, BRIAN · 2010 to 2014
$5.6M
Linguistic and NonLinguistic Functions of Frontal CortexR01DC009209 · NIDCD · UNIVERSITY OF PENNSYLVANIA · PI THOMPSONSCHILL, SHARON L · 2008 to 2018
$5.2M
Microseizures, Ultra-slow & High Frequency Oscillations: Biomarkers of epilepsyR01NS063039 · NINDS · MAYO CLINIC ROCHESTER · PI WORRELL, GREGORY A · 2009 to 2013
$1.5M
Localizing epileptic networks using novel 7T MRI glutamate imagingK23NS092973 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI DAVIS, KATHRYN ADAMIAK · 2016 to 2020
$980k
CRCNS: US-France Modeling & Predicting BCI Learning from Dynamic NetworksR01HD086888 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI BASSETT, DANIELLE SMITH · 2015 to 2018
$506k
NICHD NIH HHS R01 HD086888NIDCD NIH HHS R01 DC009209NINDS NIH HHS K23 NS092973NINDS NIH HHS R01 NS063039NINDS NIH HHS U24 NS063930
6 · The paper itself

Abstract

Human epilepsy patients suffer from spontaneous seizures, which originate in brain regions that also subserve normal function. Prior studies demonstrate focal, neocortical epilepsy is associated with dysfunction, several hours before seizures. How does the epileptic network perpetuate dysfunction during baseline periods? To address this question, we developed an unsupervised machine learning technique to disentangle patterns of functional interactions between brain regions, or subgraphs, from dynamic functional networks constructed from approximately 100 h of intracranial recordings in each of 22 neocortical epilepsy patients. Using this approach, we found: (1) subgraphs from ictal (seizure) and interictal (baseline) epochs are topologically similar, (2) interictal subgraph topology and dynamics can predict brain regions that generate seizures, and (3) subgraphs undergo slower and more coordinated fluctuations during ictal epochs compared to interictal epochs. Our observations suggest that seizures mark a critical shift away from interictal states that is driven by changes in the dynamical expression of strongly interacting components of the epileptic network.

Indexed as

Unsupervised Machine LearningBrain MappingCluster AnalysisDatasets as TopicDrug Resistant EpilepsyElectrocorticographyElectrodes, ImplantedFemaleHumansMaleModels, NeurologicalNeocortexSeizuresTime Factorsdynamic network neuroscienceepileptic networkfunctional subgraphsinterictalnon-negative matrix factorizationprediction

Identifiers

PMID28303256
PMCPMC5343278
OpenAlexW2951497492

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.