Evidence map›Paper›PMID 28302951›Full record

ArticleMicrobes and environments2017

Generation of Small Colony Variants in Biofilms by Escherichia coli Harboring a Conjugative F Plasmid.

Yosuke Tashiro, Hiroaki Eida, Satoshi Ishii, Hiroyuki Futamata, Satoshi Okabe

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 33 citations in OpenAlex.

  1. Biofilm formation associated with calcium phosphate coating on implant metals.Journal of materials science. Materials in medicine · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. The Evolution of Heteroresistance via Small Colony Variants inbioRxiv : the preprint server for biology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Antibiotic Tolerance ofAntibiotics (Basel, Switzerland) · 2020
    Review
  12. Article
  13. Urinary tract infection caused by a small colony variant form of capnophilicAntimicrobial resistance and infection control · 2018
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Yosuke TashiroDivision of Environmental Engineering, Faculty of Engineering, Hokkaido University.
Hiroaki Eida
Satoshi Ishii
Hiroyuki Futamata
Satoshi Okabe
Hokkaido University · JPShizuoka University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A conjugative F plasmid induces mature biofilm formation by Escherichia coli by promoting F-pili-mediated cell-cell interactions and increasing the expression of biofilm-related genes. We herein demonstrated another function for the F plasmid in E. coli biofilms; it contributes to the emergence of genetic and phenotypic variations by spontaneous mutations. Small colony variants (SCVs) were more frequently generated in a continuous flow-cell biofilm than in the planktonic state of E. coli harboring the F plasmid. E. coli SCVs represented typical phenotypic changes such as slower growth, less biofilm formation, and greater resistance to aminoglycoside antibiotics than the parent strain. Genomic and complementation analyses indicated that the small colony phenotype was caused by the insertion of Tn1000, which was originally localized in the F plasmid, into the hemB gene. Furthermore, the Tn1000 insertion was removed from hemB in the revertant, which showed a normal colony phenotype. This study revealed that the F plasmid has the potential to increase genetic variations not only by horizontal gene transfer via F pili, but also by site-specific recombination within a single cell.

Indexed as

F FactorPhenotypeAminoglycosidesAnti-Bacterial AgentsBiofilmsDNA Transposable ElementsEscherichia coliEscherichia coli ProteinsGenetic Complementation TestGenetic VariationGenome, BacterialMutagenesis, InsertionalAminoglycosidesAnti-Bacterial AgentsDNA Transposable ElementsEscherichia coli Proteins

Identifiers

PMID28302951
PMCPMC5371073
OpenAlexW2594927926

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.