Evidence map›Paper›PMID 28293542›Full record

ArticleFrontiers in cellular and infection microbiology2017

Whole Genome Sequence and Phylogenetic Analysis Show

Zilia Y Muñoz-Ramírez, Alfonso Mendez-Tenorio, Ikuko Kato, Maria M Bravo, Cosmeri Rizzato, Kaisa Thorell, Roberto Torres, Francisco Aviles-Jimenez, Margarita Camorlinga, Federico Canzian and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 77 citations in OpenAlex.

  1. Microbiology and molecular biology reviews : MMBR · 2026
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  4. Helicobacter pylori Infection in Colombia: Phylogeny, Resistome, and Virulome.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2025
    Article
  5. Cooperation BetweenMicroorganisms · 2024
    Article
  6. Article
  7. Microorganisms · 2024
    Article
  8. Historical and Molecular Perspectives on the Presence ofInternational journal of molecular sciences · 2024
    Review
  9. Article
  10. Pathogenomics of Helicobacter pylori.Current topics in microbiology and immunology · 2023
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Whole Genome Sequencing of PediatricFrontiers in microbiology · 2021
    Article
  17. Article
  18. Whole-Genome-BasedFrontiers in microbiology · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 6 countries.

Zilia Y Muñoz-RamírezLaboratorio de Biotecnología y Bioinformática Genómica, ENCB, Instituto Politécnico Nacional Ciudad de México, Mexico.
Alfonso Mendez-TenorioLaboratorio de Biotecnología y Bioinformática Genómica, ENCB, Instituto Politécnico Nacional Ciudad de México, Mexico.
Ikuko KatoDepartment of Oncology and of Pathology, Wayne State University School of Medicine Detroit, MI, USA.
Maria M BravoGrupo de Investigación en Biología del Cáncer, Instituto Nacional de Cancerologia Bogota, Colombia.
Cosmeri RizzatoDipartmento di Ricerca Traslazionale e Nuove Tecnologie in Medicina e Chirurgia, Università di Pisa Pisa, Italy.
Kaisa ThorellDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet Stockholm, Sweden.
Roberto TorresLaboratorio de Biotecnología y Bioinformática Genómica, ENCB, Instituto Politécnico Nacional Ciudad de México, Mexico.
Francisco Aviles-JimenezUnidad de Investigacion en Enfermedades Infecciosas, IMSS Ciudad de México, Mexico.
Margarita CamorlingaUnidad de Investigacion en Enfermedades Infecciosas, IMSS Ciudad de México, Mexico.
Federico CanzianGenomic Epidemiology Group, German Cancer Research Center (DKFZ) Heidelberg, Germany.
Javier TorresUnidad de Investigacion en Enfermedades Infecciosas, IMSS Ciudad de México, Mexico.
Instituto Politécnico Nacional · MXMexican Social Security Institute · MXHeidelberg University · DEInstituto Nacional de Cancerología · COKarolinska Institutet · SEUniversity of Pisa · ITWayne State University · US

Funding

High Resolution Helicobacter SNP Typing to Identify Carcinogenic cagPAI VariantsR21CA182822 · NCI · WAYNE STATE UNIVERSITY · PI KATO, IKUKO · 2014 to 2015
$320k
NCI NIH HHS R21 CA182822
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Evolution, MolecularPhylogenyAfricaAmericasAsiaBacterial ProteinsCluster AnalysisDatabases, Nucleic AcidDNA FingerprintingDNA ProbesEuropeGenetic VariationGenome, BacterialGenotypeHelicobacter pyloriHumansBacterial ProteinsDNA ProbesH. pyloriLatin Americaphylogenetic analysiswhole genome sequence

Identifiers

PMID28293542
PMCPMC5328995
OpenAlexW2593133856

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.