Evidence map›Paper›PMID 28293216›Full record

ArticleFrontiers in microbiology2017

Comparative Genome Analysis of Three Thiocyanate Oxidizing

Tom Berben, Lex Overmars, Dimitry Y Sorokin, Gerard Muyzer

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
13.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Unusual CytochromeInternational journal of molecular sciences · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Transcriptomic Analysis of TwoFrontiers in microbiology · 2019
    Article
  7. Article
  8. Comparative Genomics ofFrontiers in microbiology · 2019
    Article
  9. Article
  10. Review
  11. Draft Genome Sequence ofGenome announcements · 2017
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Tom BerbenMicrobial Systems Ecology, Department of Aquatic Microbiology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam Amsterdam, Netherlands.
Lex OvermarsMicrobial Systems Ecology, Department of Aquatic Microbiology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam Amsterdam, Netherlands.
Dimitry Y SorokinWinogradsky Institute of Microbiology, Research Centre of Biotechnology, Russian Academy of SciencesMoscow, Russia; Department of Biotechnology, Delft University of TechnologyDelft, Netherlands.
Gerard MuyzerMicrobial Systems Ecology, Department of Aquatic Microbiology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam Amsterdam, Netherlands.
University of Amsterdam · NLDelft University of Technology · NL

Funding

European Research Council 322551
6 · The paper itself

Abstract

Thiocyanate is a C1 compound containing carbon, nitrogen, and sulfur. It is a (by)product in a number of natural and industrial processes. Because thiocyanate is toxic to many organisms, including humans, its removal from industrial waste streams is an important problem. Although a number of bacteria can use thiocyanate as a nitrogen source, only a few can use it as an electron donor. There are two distinct pathways to use thiocyanate: (i) the "carbonyl sulfide pathway," which has been extensively studied, and (ii) the "cyanate pathway," whose key enzyme, thiocyanate dehydrogenase, was recently purified and studied. Three species of

Indexed as

chemolithoautotrophssoda lakesThioalkalivibriothiocyanatethiocyanate dehydrogenase

Identifiers

PMID28293216
PMCPMC5328954
OpenAlexW2592547294

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.