Evidence map›Paper›PMID 28289389›Full record

ArticleFrontiers in pharmacology2017

Understanding Physiology in the Continuum: Integration of Information from Multiple -

Kubra Kamisoglu, Alison Acevedo, Richard R Almon, Susette Coyle, Siobhan Corbett, Debra C Dubois, Tung T Nguyen, William J Jusko, Ioannis P Androulakis

Abstract read
In one paragraph

Article in Frontiers in pharmacology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Modeling Corticosteroid Pharmacogenomics and Proteomics in Rat Liver.The Journal of pharmacology and experimental therapeutics · 2018
    Article
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kubra KamisogluDepartment of Pharmaceutical Sciences, School of Pharmacy and Pharmaceutical Sciences, University at Buffalo, Buffalo NY, USA.
Alison AcevedoDepartment of Biomedical Engineering, Rutgers University, Piscataway NJ, USA.
Richard R AlmonDepartment of Biological Sciences, University at Buffalo, Buffalo NY, USA.
Susette CoyleDepartment of Surgery, Rutgers Robert Wood Johnson Medical School, New Brunswick NJ, USA.
Siobhan CorbettDepartment of Surgery, Rutgers Robert Wood Johnson Medical School, New Brunswick NJ, USA.
Debra C DuboisDepartment of Biological Sciences, University at Buffalo, Buffalo NY, USA.
Tung T NguyenBioMaPS Institute for Quantitative Biology, Rutgers University, Piscataway NJ, USA.
William J JuskoDepartment of Pharmaceutical Sciences, School of Pharmacy and Pharmaceutical Sciences, University at Buffalo, Buffalo NY, USA.
Ioannis P AndroulakisDepartment of Biomedical Engineering, Rutgers University, PiscatawayNJ, USA; Department of Chemical Engineering, Rutgers University, PiscatawayNJ, USA.

Funding

Corticosteroid Pharmacokinetics and PharmacodynamicsR37GM024211 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI JUSKO, WILLIAM J. · 2005 to 2014
$6.4M
UMDNJ TRAINING GRANT IN BIOTECHNOLOGYT32GM008339 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI YARMUSH, MARTIN L · 1989 to 2019
$6.1M
CORTICOSTEROID PHARMACOKINETICS/DYNAMICSR01GM024211 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI JUSKO, WILLIAM J. · 1985 to 2018
$4.7M
HORMONE AND CYTOKINE REGULATION OF ENDOTOXIN INJURY(RMI)R37GM034695 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI LOWRY, STEPHEN F · 1997 to 2006
$4.0M
SKELETAL MUSCLE PROTEIN RESPONSE TO INJURY AND REPLETIONR01GM034695 · NIGMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CORBETT, SIOBHAN A · 1985 to 2011
$2.8M
Bioinformatics Analysis of Control Mechanisms of HypermetabolismR01GM082974 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI ANDROULAKIS, IOANNIS P · 2008 to 2011
$1.6M
NIGMS NIH HHS R01 GM024211NIGMS NIH HHS R01 GM034695NIGMS NIH HHS R01 GM082974NIGMS NIH HHS R37 GM024211NIGMS NIH HHS R37 GM034695NIGMS NIH HHS T32 GM008339
6 · The paper itself

Abstract

In this paper, we discuss approaches for integrating biological information reflecting diverse physiologic levels. In particular, we explore statistical and model-based methods for integrating transcriptomic, proteomic and metabolomics data. Our case studies reflect responses to a systemic inflammatory stimulus and in response to an anti-inflammatory treatment. Our paper serves partly as a review of existing methods and partly as a means to demonstrate, using case studies related to human endotoxemia and response to methylprednisolone (MPL) treatment, how specific questions may require specific methods, thus emphasizing the non-uniqueness of the approaches. Finally, we explore novel ways for integrating

Indexed as

glucocorticoidsinflammationLPSmetabolomicspharmacogenomicsproteomicstranscriptomics

Identifiers

PMID28289389
PMCPMC5327699

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.