Evidence map›Paper›PMID 28289085›Full record

ArticleJournal of bacteriology2017

The Small Protein SgrT Controls Transport Activity of the Glucose-Specific Phosphotransferase System.

Chelsea R Lloyd, Seongjin Park, Jingyi Fei, Carin K Vanderpool

Abstract read
In one paragraph

Article in Journal of bacteriology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Large Roles of Small Proteins.Annual review of microbiology · 2024
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Two for one: regulatory RNAs that encode small proteins.Trends in biochemical sciences · 2023
    Review
  13. Review
  14. Review
  15. How Bacterial Pathogens Coordinate Appetite with Virulence.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Dual-function AzuCR RNA modulates carbon metabolism.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Chelsea R LloydDepartment of Microbiology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Seongjin ParkDepartment of Biochemistry and Molecular Biology, University of Chicago, Institute for Biophysical Dynamics, Chicago, Illinois, USA.
Jingyi FeiDepartment of Biochemistry and Molecular Biology, University of Chicago, Institute for Biophysical Dynamics, Chicago, Illinois, USA.
Carin K VanderpoolDepartment of Microbiology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA cvanderp@life.illinois.edu.

Funding

Molecular Determinants of Regulatory Hierarchy for Bacterial Small RNAsR01GM092830 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI VANDERPOOL, CARIN K · 2010 to 2020
$2.8M
NIGMS NIH HHS R01 GM092830
6 · The paper itself

Abstract

The bacterial small RNA (sRNA) SgrS has been a fruitful model for discovery of novel RNA-based regulatory mechanisms and new facets of bacterial physiology and metabolism. SgrS is one of only a few characterized dual-function sRNAs. SgrS can control gene expression posttranscriptionally via sRNA-mRNA base-pairing interactions. Its second function is coding for the small protein SgrT. Previous work demonstrated that both functions contribute to relief of growth inhibition caused by glucose-phosphate stress, a condition characterized by disrupted glycolytic flux and accumulation of sugar phosphates. The base-pairing activity of SgrS has been the subject of numerous studies, but the activity of SgrT is less well characterized. Here, we provide evidence that SgrT acts to specifically inhibit the transport activity of the major glucose permease PtsG. Superresolution microscopy demonstrated that SgrT localizes to the cell membrane in a PtsG-dependent manner. Mutational analysis determined that residues in the N-terminal domain of PtsG are important for conferring sensitivity to SgrT-mediated inhibition of transport activity. Growth assays support a model in which SgrT-mediated inhibition of PtsG transport activity reduces accumulation of nonmetabolizable sugar phosphates and promotes utilization of alternative carbon sources by modulating carbon catabolite repression. The results of this study expand our understanding of a basic and well-studied biological problem, namely, how cells coordinate carbohydrate transport and metabolism. Further, this work highlights the complex activities that can be carried out by sRNAs and small proteins in bacteria.

Indexed as

Gene Expression Regulation, BacterialBiological TransportEscherichia coliEscherichia coli ProteinsGlucosePhosphoenolpyruvate Sugar Phosphotransferase SystemPromoter Regions, GeneticEscherichia coli ProteinsGlucosephosphoenolpyruvate-glucose phosphotransferasePhosphoenolpyruvate Sugar Phosphotransferase SystemSgrT protein, E coliHfqPTSRNase E

Identifiers

PMID28289085
PMCPMC5424253

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.