ArticleBMC genetics2017
Genetic diversity of a New Zealand multi-breed sheep population and composite breeds' history revealed by a high-density SNP chip.
Article in BMC genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 45 citations in OpenAlex.
- Genetic diversity and selection signatures in sheep breeds.Journal of applied genetics · 2025Article
- Genetic Diversity and Conservation Priority of Korean Chicken Breeds Using Single-Nucleotide Polymorphism Markers.Animals : an open access journal from MDPI · 2025Article
- Recent advances in the genomic resources for sheep.Mammalian genome : official journal of the International Mammalian Genome Society · 2023Review
- SNP- and haplotype-based single-step genomic predictions for body weight, wool, and reproductive traits in North American Rambouillet sheep.Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie · 2023Article
- Successful restoration of archived ovine formalin fixed paraffin-embedded tissue DNA and single nucleotide polymorphism analysis.Veterinary research communications · 2023Article
- Detection of Selection Signatures in Anqing Six-End-White Pigs Based on Resequencing Data.Genes · 2022Article
- Article
- Genetic variation in skin traits in New Zealand lambs.Journal of the science of food and agriculture · 2022Article
- The genomic structure of isolation across breed, country and strain for important South African and Australian sheep populations.BMC genomics · 2022Article
- Detection and Visualization of Heterozygosity-Rich Regions and Runs of Homozygosity in Worldwide Sheep Populations.Animals : an open access journal from MDPI · 2021Article
- A Comprehensive Comparison of Haplotype-Based Single-Step Genomic Predictions in Livestock Populations With Different Genetic Diversity Levels: A Simulation Study.Frontiers in genetics · 2021Article
- Genome Divergence and Dynamics in the Thin-Tailed Desert Sheep From Sudan.Frontiers in genetics · 2021Article
- Population structure of indigenous southern African goats based on the Illumina Goat50K SNP panel.Tropical animal health and production · 2020Article
- On the origin of European sheep as revealed by the diversity of the Balkan breeds and by optimizing population-genetic analysis tools.Genetics, selection, evolution : GSE · 2020Article
- Genetic Connectedness Between Norwegian White Sheep and New Zealand Composite Sheep Populations With Similar Development History.Frontiers in genetics · 2020Article
- Genetic diversity and genetic origin of Lanping black-boned sheep investigated by genome-wide single-nucleotide polymorphisms (SNPs).Archives animal breeding · 2020Article
- Mapping Recombination Rate on the Autosomal Chromosomes Based on the Persistency of Linkage Disequilibrium Phase Among Autochthonous Beef Cattle Populations in Spain.Frontiers in genetics · 2019Article
- Linkage disequilibrium in Brazilian Santa Inês breed, Ovis aries.Scientific reports · 2018Article
- Genomic diversity and population structure of three autochthonous Greek sheep breeds assessed with genome-wide DNA arrays.Molecular genetics and genomics : MGG · 2018Article
- Expected benefit of genomic selection over forward selection in conifer breeding and deployment.PloS one · 2018Article
Corrections and comments
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Authors and funding
8 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundKnowledge about the genetic diversity of a population is a crucial parameter for the implementation of successful genomic selection and conservation of genetic resources. The aim of this research was to establish the scientific basis for the implementation of genomic selection in a composite Terminal sheep breeding scheme by providing consolidated linkage disequilibrium (LD) measures across SNP markers, estimating consistency of gametic phase between breed-groups, and assessing genetic diversity measures, such as effective population size (N
resultsOverall, as expected, levels of pairwise LD decreased with increasing distance between SNP pairs. The mean LD r
conclusionsThis study reports, for the first time, estimates of linkage disequilibrium, genetic diversity and population structure parameters from a genome-wide perspective in New Zealand Terminal Sire composite sheep breeds. The levels of linkage disequilibrium indicate that genomic selection could be implemented with the high density SNP panel. The moderate to high consistency of gametic phase between breed-groups and overlapping population structure support the pooling of the animals in a mixed training population for genomic predictions. In addition, the moderate to high N
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.